Evidence map›Paper›PMID 12364593›Full record

ArticleNucleic acids research2002

Sp1 and AP2 regulate but do not constitute TATA-less human TAF(II)55 core promoter activity.

Tianyuan Zhou, Cheng-Ming Chiang

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Regulation of the ClC-2 lung epithelial chloride channel by glycosylation of SP1.American journal of respiratory cell and molecular biology · 2006
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Tianyuan ZhouDepartment of Biochemistry, Case Western Reserve University School of Medicine, 10900 Euclid Avenue, Cleveland, OH 44106-4935, USA.
Cheng-Ming Chiang
University School · US

Funding

ROLE OF CELLULAR PROTEINS IN HPV TRANSCRIPTIONR01CA081017 · NCI · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI CHIANG, CHENG-MING · 2000 to 2004
$1.0M
ROLE OF GENERAL COFACTOR IN TAF-INDEPENDENT ACTIVATIONR01GM059643 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI CHIANG, CHENG-MING · 2000 to 2003
$705k
NCI NIH HHS CA81017NCI NIH HHS R01 CA081017NIGMS NIH HHS GM59643NIGMS NIH HHS R01 GM059643
6 · The paper itself

Abstract

Human TAF(II)55 (hTAF(II)55), a component of the general transcription factor TFIID, is the only general transcription factor encoded by an intronless gene identified thus far. Analysis of the TATA-less hTAF(II)55 promoter-proximal sequence reveals putative binding sites for STAT-1, MEF2, E2F, Sp1, AP2, AREB6 and E47. Using chromatin immunoprecipitation, DNase I footprinting and electrophoretic mobility shift assays, we demonstrate that Sp1 and AP2 can bind simultaneously to juxtaposed Sp1- and AP2-binding sites in the hTAF(II)55 promoter-proximal region and functionally modulate hTAF(II)55 promoter activity, as evidenced by reporter gene assays performed in transiently transfected human C-33A and insect SL2 cell lines. Interestingly, removal of all the promoter-proximal Sp1-binding sites does not impair the function of the hTAF(II)55 core promoter. Moreover, a 52-bp DNA fragment containing only the hTAF(II)55 initiator (Inr) and downstream promoter element (DPE) is able to support Gal4-VP16-mediated activation in vivo and in vitro. Our data suggest that Sp1, although it plays an enhancing role in hTAF(II)55 gene expression, is not essential for hTAF(II)55 core promoter activity. Interestingly, mutations introduced at the Inr and DPE differentially affect the selection of transcription start sites, suggesting that these two core promoter elements play a non-redundant role in the function of TATA-less promoters.

Indexed as

Base SequenceBinding SitesDNA-Binding ProteinsGene ExpressionHeLa CellsHumansMolecular Sequence DataPlasmidsPrecipitin TestsPromoter Regions, GeneticProtein BindingSp1 Transcription FactorTATA-Binding Protein Associated FactorsTATA BoxTranscription Factor AP-2Transcription FactorsDNA-Binding ProteinsSp1 Transcription FactorTAF7 protein, humanTATA-Binding Protein Associated FactorsTranscription Factor AP-2Transcription FactorsTranscription Factor TFIID

Identifiers

PMID12364593
PMCPMC140537
OpenAlexW2101794645

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.