Evidence map›Paper›PMID 12917344›Full record

ArticleMolecular and cellular biology2003

Human mediator enhances activator-facilitated recruitment of RNA polymerase II and promoter recognition by TATA-binding protein (TBP) independently of TBP-associated factors.

Shwu-Yuan Wu, Tianyuan Zhou, Cheng-Ming Chiang

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. MedProDB: A database of Mediator proteins.Computational and structural biotechnology journal · 2021
    Article
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  8. Article
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  14. The Mediator complex and transcription elongation.Biochimica et biophysica acta · 2013
    Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Shwu-Yuan WuDepartment of Biochemistry, Case Western Reserve University School of Medicine, Cleveland, Ohio 44106, USA.
Tianyuan Zhou
Cheng-Ming Chiang
University School · USCase Western Reserve University · US

Funding

ROLE OF CELLULAR PROTEINS IN HPV TRANSCRIPTIONR01CA081017 · NCI · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI CHIANG, CHENG-MING · 2000 to 2004
$1.0M
ROLE OF GENERAL COFACTOR IN TAF-INDEPENDENT ACTIVATIONR01GM059643 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI CHIANG, CHENG-MING · 2000 to 2003
$705k
NCI NIH HHS CA81017NCI NIH HHS R01 CA081017NIGMS NIH HHS GM59643NIGMS NIH HHS R01 GM059643
6 · The paper itself

Abstract

Mediator is a general cofactor implicated in the functions of many transcriptional activators. Although Mediator with different protein compositions has been isolated, it remains unclear how Mediator facilitates activator-dependent transcription, independent of its general stimulation of basal transcription. To define the mechanisms of Mediator function, we isolated two forms of human Mediator complexes (Mediator-P.5 and Mediator-P.85) and demonstrated that Mediator-P.5 clearly functions by enhancing activator-mediated recruitment of RNA polymerase II (pol II), whereas Mediator-P.85 works mainly by stimulating overall basal transcription. The coactivator function of Mediator-P.5 was not impaired when TATA-binding protein (TBP) was used in place of TFIID, but it was abolished when another general cofactor, PC4, was omitted from the reaction or when Mediator-P.5 was added after pol II entry into the preinitiation complex. Moreover, Mediator- P.5 is able to enhance TBP binding to the TATA box in an activator-dependent manner. Our data provides biochemical evidence that Mediator functions by facilitating activator-mediated recruitment of pol II and also promoter recognition by TBP, both of which can occur in the absence of TBP-associated factors in TFIID.

Indexed as

Cells, CulturedCyclin-Dependent Kinase 8Cyclin-Dependent KinasesDeoxyribonuclease IHumansImmediate-Early ProteinsMembrane ProteinsPromoter Regions, GeneticProtein IsoformsRecombinant ProteinsRepressor ProteinsRNA Polymerase IITATA-Binding Protein Associated FactorsTATA-Box Binding ProteinTrans-ActivatorsTranscriptional ActivationCDK8 protein, humanCyclin-Dependent Kinase 8Cyclin-Dependent KinasesDeoxyribonuclease IIFRD2 protein, humanImmediate-Early ProteinsMembrane ProteinsProtein IsoformsRecombinant ProteinsRepressor ProteinsRNA Polymerase IITATA-Binding Protein Associated FactorsTATA-Box Binding ProteinTrans-ActivatorsTranscription FactorsTranscription Factor TFIID

Identifiers

PMID12917344
PMCPMC180944
OpenAlexW2152178694

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.