Evidence map›Paper›PMID 16408210›Full record

ArticleMolecular genetics and genomics : MGG2006

Rapid depletion of mutant eukaryotic initiation factor 5A at restrictive temperature reveals connections to actin cytoskeleton and cell cycle progression.

Ishita Chatterjee, Stephane R Gross, Terri Goss Kinzy, Kuang Yu Chen

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 67 citations in OpenAlex.

  1. Review
  2. Article
  3. Role of eIF5A in Mitochondrial Function.International journal of molecular sciences · 2022
    Review
  4. Article
  5. Article
  6. Article
  7. Modification of translation factor aIF5A from Sulfolobus solfataricus.Extremophiles : life under extreme conditions · 2018
    Article
  8. Article
  9. Article
  10. Exploring polyamines: Functions in embryo/fetal development.Animal nutrition (Zhongguo xu mu shou yi xue hui) · 2017
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ishita ChatterjeeDepartment of Chemistry and Chemical Biology, Rutgers-The State University of New Jersey, Piscataway, NJ 08854-8087, USA.
Stephane R Gross
Terri Goss Kinzy
Kuang Yu Chen
Johnson University · USRutgers, The State University of New Jersey · US

Funding

Structure of Eukaryotic Translation Elongation Factor 1R01GM062789 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI KINZY, TERRI GOSS · 2001 to 2004
$883k
HYPUSINE FORMATION ON EIF 5A--BIOCHEMISTRY AND FUNCTIONR01CA049695 · NCI · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI CHEN, KUANG YU · 1990 to 2000
$261k
NCI NIH HHS R01 CA49695NIGMS NIH HHS GM62789NIGMS NIH HHS R01 GM062789
6 · The paper itself

Abstract

Eukaryotic initiation factor 5A (eIF5A) is the only protein in nature that contains hypusine, an unusual amino acid derived from the modification of lysine by spermidine. Two genes, TIF51A and TIF51B, encode eIF5A in the yeast Saccharomyces cerevisiae. In an effort to understand the structure-function relationship of eIF5A, we have generated yeast mutants by introducing plasmid-borne tif51A into a double null strain where both TIF51A and TIF51B have been disrupted. One of the mutants, tsL102A strain (tif51A L102A tif51aDelta tif51bDelta) exhibits a strong temperature-sensitive growth phenotype. At the restrictive temperature, tsL102A strain also exhibits a cell shape change, a lack of volume change in response to temperature increase and becomes more sensitive to ethanol, a hallmark of defects in the PKC/WSC cell wall integrity pathway. In addition, a striking change in actin dynamics and a complete cell cycle arrest at G1 phase occur in tsL102A cells at restrictive temperature. The temperature-sensitivity of tsL102A strain is due to a rapid loss of mutant eIF5A with the half-life reduced from 6 h at permissive temperature to 20 min at restrictive temperature. Phenylmethyl sulfonylfluoride (PMSF), an irreversible inhibitor of serine protease, inhibited the degradation of mutant eIF5A and suppressed the temperature-sensitive growth arrest. Sorbitol, an osmotic stabilizer that complement defects in PKC/WSC pathways, stabilizes the mutant eIF5A and suppresses all the observed temperature-sensitive phenotypes.

Indexed as

Cell CycleMutationTemperatureActinsAmino Acid SequenceBase SequenceBlotting, WesternCloning, MolecularCytoskeletonDNA PrimersEukaryotic Translation Initiation Factor 5AFlow CytometryGenes, FungalMutagenesisPeptide Initiation FactorsReverse Transcriptase Polymerase Chain ReactionActinsDNA PrimersEukaryotic Translation Initiation Factor 5APeptide Initiation FactorsRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID16408210
OpenAlexW1981482024

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.