Evidence map›Paper›PMID 17229714›Full record

ArticleJournal of virology2007

ALY is a common coactivator of RUNX1 and c-Myb on the type B leukemogenic virus enhancer.

Jennifer A Mertz, Ryuji Kobayashi, Jaquelin P Dudley

Abstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.2field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. mAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Jennifer A MertzSection of Molecular Genetics and Microbiology, University of Texas at Austin, One University Station, A5000 24th Street and Speedway, ESB 226, Austin, TX 78712-0162, USA.
Ryuji Kobayashi
Jaquelin P Dudley
Laboratory of Molecular Genetics · PLThe University of Texas at Austin · USThe University of Texas MD Anderson Cancer Center · US

Funding

THYMUS INFECTION AND IMMUNITY IN VIRAL LEUKEMOGENESISP01CA077760 · NCI · UNIVERSITY OF PENNSYLVANIA · PI ROSS, SUSAN R · 2000 to 2004
$4.4M
Post-Transcriptional Regulation of MMTVR01CA116813 · NCI · UNIVERSITY OF TEXAS AT AUSTIN · PI DUDLEY, JAQUELIN PAGE · 2006 to 2010
$1.3M
NCI NIH HHS P01 CA077760NCI NIH HHS P01 CA 77760NCI NIH HHS R01 CA 116813NCI NIH HHS R01 CA116813
6 · The paper itself

Abstract

Type B leukemogenic virus (TBLV), a mouse mammary tumor virus (MMTV) variant, often induces T-cell leukemias and lymphomas by c-myc activation following viral DNA integration. Transfection assays using a c-myc reporter plasmid indicated that the TBLV long terminal repeat (LTR) enhancer is necessary for T-cell-specific increases in basal reporter activity. The sequence requirements for this effect were studied using mutations of the 62-bp enhancer region in an MMTV LTR reporter vector. Deletion of a nuclear factor A-binding site dramatically reduced reporter activity in Jurkat T cells. However, a 41-bp enhancer missing the RUNX1 site still retained minimal enhancer function. DNA affinity purification using a TBLV enhancer oligomer containing the RUNX1 binding site followed by mass spectrometry resulted in the identification of ALY. Subsequent experiments focused on the reconstitution of enhancer activity in epithelial cells. ALY overexpression synergized with RUNX1B on TBLV enhancer activity, and synergism required the RUNX1B-binding site. A predicted c-Myb binding site in the enhancer was confirmed after c-myb overexpression elevated TBLV LTR reporter activity, and overexpression of c-Myb and RUNX1B together showed additive effects on reporter gene levels. ALY also synergized with c-Myb, and coimmunoprecipitation experiments demonstrated an interaction between ALY and c-Myb. These experiments suggest a central role for ALY in T-cell enhancer function and oncogene activation.

Indexed as

AnimalsBinding SitesCell LineCore Binding Factor Alpha 2 SubunitEnhancer Elements, GeneticHumansMiceMolecular Sequence DataMutationNuclear ProteinsPromoter Regions, GeneticProtein BindingProto-Oncogene Proteins c-mybRetroviridaeRNA-Binding ProteinsTranscription FactorsALYREF protein, humanCore Binding Factor Alpha 2 SubunitNuclear ProteinsProto-Oncogene Proteins c-mybRNA-Binding ProteinsTranscription Factors

Identifiers

PMID17229714
PMCPMC1866045
OpenAlexW2162706767

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.