Evidence map›Paper›PMID 19307307›Full record

ArticleMolecular and cellular biology2009

Structural and functional basis of a role for CRKL in a fibroblast growth factor 8-induced feed-forward loop.

Ji-Heui Seo, Atsushi Suenaga, Mariko Hatakeyama, Makoto Taiji, Akira Imamoto

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. FGF1 ameliorates obesity-associated hepatic steatosis by reversing IGFBP2 hypermethylation.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2023
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  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Murine model indicates 22q11.2 signaling adaptorProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Fibroblast growth factors, old kids on the new block.Seminars in cell & developmental biology · 2016
    Review
  14. Review
  15. Review
  16. The neural crest in cardiac congenital anomalies.Differentiation; research in biological diversity · 2012
    Review
  17. Article
  18. Article
  19. The structural biology of the FGF19 subfamily.Advances in experimental medicine and biology · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Ji-Heui SeoBen May Department for Cancer Research, University of Chicago, Chicago, Illinois 60637, USA.
Atsushi Suenaga
Mariko Hatakeyama
Makoto Taiji
Akira Imamoto
RIKEN Advanced Science Institute · JPUniversity of Chicago · US

Funding

Developmental/Genetic Analysis of DiGeoge ModelsR01DE015883 · NIDCR · UNIVERSITY OF CHICAGO · PI IMAMOTO, AKIRA · 2004 to 2008
$1.6M
NIDCR NIH HHS R01 DE015883
6 · The paper itself

Abstract

The adapter protein CRKL is required for the normal development of multiple tissues that rely on fibroblast growth factor 8 (FGF8). The precise role of CRKL in receptor signaling has been unclear, however. To address this issue, we first modeled the three-dimensional structure of CRKL by molecular dynamics. By taking advantage of structural simulations, we performed in silico analysis of the interactions of the autophosphorylation sites of FGR receptor 1 (FGFR1) with the SH2 domain of CRKL or a highly related protein, CRK. As predicted by simulations, we confirm the specific physical interaction of phosphorylated Y463 (pY463) in FGFR1 with the CRKL SH2 domain at an affinity approximately 30-fold stronger than that of CRK. We also provide evidence that interactions outside of the core YXXP motif have a significant impact on physical association, which is consistent with predictions from molecular-dynamics simulations. Furthermore, we identify CRKL as an essential component of an FGF8-induced feed-forward loop permissive for efficient activation of the mitogen-activated protein kinase Erk1/2, as well as FGF8-induced anchorage-independent cell growth, using Crkl-deficient cells or a pY463 synthetic peptide. Although many cells generally require cell-matrix adhesion, our results demonstrate that CRKL permits cells to bypass the strict need for adhesion in response to FGF8 through direct interaction with receptor.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid SequenceAnimalsCell AdhesionCell ProliferationComputational BiologyComputer SimulationFeedback, PhysiologicalFibroblast Growth Factor 8HumansMAP Kinase Kinase 1MiceModels, BiologicalModels, MolecularMolecular Sequence DataMonomeric GTP-Binding ProteinsAdaptor Proteins, Signal TransducingCRKL proteinCRK protein, humanFibroblast Growth Factor 8MAP Kinase Kinase 1Monomeric GTP-Binding ProteinsNuclear ProteinsPeptidesPhosphotyrosineProto-Oncogene Proteins c-crkraf KinasesReceptor, Fibroblast Growth Factor, Type 1

Identifiers

PMID19307307
PMCPMC2681998
OpenAlexW2114694123

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.