Evidence map›Paper›PMID 19352491›Full record

ArticlePloS one2009

Lentiviral vectors and protocols for creation of stable hESC lines for fluorescent tracking and drug resistance selection of cardiomyocytes.

Hiroko Kita-Matsuo, Maria Barcova, Natalie Prigozhina, Nathan Salomonis, Karen Wei, Jeffrey G Jacot, Brandon Nelson, Sean Spiering, René Haverslag, Changsung Kim and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 132 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed, 1 pooled it
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 1 synthesis or guideline pooled it, 225 citations in OpenAlex.

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  16. Proteomic analysis of mitochondrial biogenesis in cardiomyocytes differentiated from human induced pluripotent stem cells.American journal of physiology. Regulatory, integrative and comparative physiology · 2021
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72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 1 country.

Hiroko Kita-MatsuoBurnham Institute for Medical Research, La Jolla, California, United States of America.
Maria Barcova
Natalie Prigozhina
Nathan Salomonis
Karen Wei
Jeffrey G Jacot
Brandon Nelson
Sean Spiering
René Haverslag
Changsung Kim
Maria Talantova
Ruchi Bajpai
Diego Calzolari
Alexey Terskikh
Andrew D McCulloch
Jeffrey H Price
Bruce R Conklin
H S Vincent Chen
Mark Mercola
Sanford Burnham Prebys Medical Discovery Institute · USInstitute for Medical Research · USUniversity of California, San Diego · USGladstone Institutes · USUniversity of California, San Francisco · US

Funding

Vinculin and Talin in Cardiocyte Integrity and AdhesionP01HL046345 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PETERSON, KIRK L · 1992 to 2011
$25.0M
THE NHLBI BAY AREA FUNCTIONAL GENOMICS CONSORTIUMU01HL066621 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI YOUNG, STEPHEN G · 2000 to 2007
$12.2M
Molecular Biology of Heart InductionR37HL059502 · NHLBI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI MERCOLA, MARK · 2007 to 2011
$1.6M
GenMAPP: A tool for pathway analysis of genomic dataR01HG003053 · NHGRI · J. DAVID GLADSTONE INSTITUTES · PI CONKLIN, BRUCE R · 2004 to 2006
$1.3M
Reconstruction & Modeling of Networks Involved in Cardiomyocyte DifferentiationR33HL088266 · NHLBI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI MERCOLA, MARK · 2007 to 2009
$1.0M
NHGRI NIH HHS HG003053NHGRI NIH HHS R01 HG003053NHLBI NIH HHS 5P01HL46345-12NHLBI NIH HHS HL66621NHLBI NIH HHS P01 HL046345NHLBI NIH HHS R33 HL088266NHLBI NIH HHS R33HL088266NHLBI NIH HHS R37 HL059502NHLBI NIH HHS R37HL059502NHLBI NIH HHS U01 HL066621
6 · The paper itself

Abstract

backgroundDevelopmental, physiological and tissue engineering studies critical to the development of successful myocardial regeneration therapies require new ways to effectively visualize and isolate large numbers of fluorescently labeled, functional cardiomyocytes. METHODOLOGY/PRINCIPAL

findingsHere we describe methods for the clonal expansion of engineered hESCs and make available a suite of lentiviral vectors for that combine Blasticidin, Neomycin and Puromycin resistance based drug selection of pure populations of stem cells and cardiomyocytes with ubiquitous or lineage-specific promoters that direct expression of fluorescent proteins to visualize and track cardiomyocytes and their progenitors. The phospho-glycerate kinase (PGK) promoter was used to ubiquitously direct expression of histone-2B fused eGFP and mCherry proteins to the nucleus to monitor DNA content and enable tracking of cell migration and lineage. Vectors with T/Brachyury and alpha-myosin heavy chain (alphaMHC) promoters targeted fluorescent or drug-resistance proteins to early mesoderm and cardiomyocytes. The drug selection protocol yielded 96% pure cardiomyocytes that could be cultured for over 4 months. Puromycin-selected cardiomyocytes exhibited a gene expression profile similar to that of adult human cardiomyocytes and generated force and action potentials consistent with normal fetal cardiomyocytes, documenting these parameters in hESC-derived cardiomyocytes and validating that the selected cells retained normal differentiation and function. CONCLUSION/SIGNIFICANCE: The protocols, vectors and gene expression data comprise tools to enhance cardiomyocyte production for large-scale applications.

Indexed as

Genetic VectorsAdultBase SequenceBrachyury ProteinCell DifferentiationDNA PrimersDrug ResistanceEmbryonic Stem CellsFetal ProteinsFlow CytometryGene Expression ProfilingGreen Fluorescent ProteinsHumansImmunohistochemistryLentivirusMyocardiumBrachyury ProteinDNA Primersenhanced green fluorescent proteinFetal ProteinsGreen Fluorescent ProteinsT-Box Domain Proteins

Identifiers

PMID19352491
PMCPMC2662416
OpenAlexW1976747060

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.