Evidence map›Paper›PMID 19528230›Full record

ArticleMolecular and cellular biology2009

Dax1 binds to Oct3/4 and inhibits its transcriptional activity in embryonic stem cells.

Chuanhai Sun, Yuhki Nakatake, Tadayuki Akagi, Hiroki Ura, Takahiko Matsuda, Akira Nishiyama, Hiroshi Koide, Minoru S H Ko, Hitoshi Niwa, Takashi Yokota

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 73 citations in OpenAlex.

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  13. The orphan nuclear receptors at their 25-year reunion.Journal of molecular endocrinology · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Chuanhai SunDepartment of Stem Cell Biology, Graduate School of Medical Science, Kanazawa University, Ishikawa 920-8640, Japan.
Yuhki Nakatake
Tadayuki Akagi
Hiroki Ura
Takahiko Matsuda
Akira Nishiyama
Hiroshi Koide
Minoru S H Ko
Hitoshi Niwa
Takashi Yokota
Kanazawa University · JPInstitute on Aging · USHoward Hughes Medical Institute · USRIKEN Center for Integrative Medical Sciences · JP

Funding

Systematic analysis of gene regulatory networksZIAAG000656 · NIA · NATIONAL INSTITUTE ON AGING · PI SCHLESSINGER, DAVID · 2009 to 2016
$3.9M
Expression profiling of mouse embryonic and tissue stem cellsZIAAG000662 · NIA · NATIONAL INSTITUTE ON AGING · PI SCHLESSINGER, DAVID · 2009 to 2012
$2.0M
Systematic analysis of gene regulatory networksZ01AG000656 · NIA · NATIONAL INSTITUTE ON AGING · PI KO, MINORU S · 1999 to 2008
$1.6M
Transcription factor-manipulable mouse ES cell bankZIAAG000700 · NIA · NATIONAL INSTITUTE ON AGING · PI KO, MINORU · 2009 to 2011
$1.3M
Expression Profiling Of Mouse Embryonic Somatic Stem CeZ01AG000662 · NIA · NATIONAL INSTITUTE ON AGING · PI KO, MINORU S · 2001 to 2008
$1.1M
Transcription factor-manipulable mouse ES cell bankZ01AG000700 · NIA · NATIONAL INSTITUTE ON AGING · PI KO, MINORU · 1986 to 2008
$354k
Intramural NIH HHS
6 · The paper itself

Abstract

Embryonic stem (ES) cells are pluripotent cells derived from the inner cell mass of blastocysts. Transcription factor Oct3/4 is an indispensable factor in the self-renewal of ES cells. In this study, we searched for a protein that would interact with Oct3/4 in ES cells and identified an orphan nuclear hormone receptor, Dax1. The association of Dax1 with Oct3/4 was mediated through the POU-specific domain of Oct3/4. Ectopic expression of Dax1 inhibited Oct3/4-mediated activation of an artificial Oct3/4-responsive promoter. Expression of Dax1 in ES cells also reduced the activities of Nanog and Rex1 promoters, while knockdown of Dax1 increased these activities. Pulldown and gel shift assays revealed that the interaction of Dax1 with Oct3/4 abolished the DNA binding activity of Oct3/4. Chromatin immunoprecipitation assay results showed that Dax1 inhibited Oct3/4 binding to the promoter/enhancer regions of Oct3/4 and Nanog. Furthermore, overexpression of Dax1 resulted in ES cell differentiation. Taken together, these data suggest that Dax1, a novel molecule interacting with Oct3/4, functions as a negative regulator of Oct3/4 in ES cells.

Indexed as

Gene Expression Regulation, DevelopmentalTranscription, GeneticAnimalsBase SequenceCell DifferentiationCell LineDAX-1 Orphan Nuclear ReceptorDNA-Binding ProteinsEmbryonic Stem CellsHomeodomain ProteinsHumansMiceNanog Homeobox ProteinOctamer Transcription Factor-3Receptors, Retinoic AcidRecombinant Fusion ProteinsDAX-1 Orphan Nuclear ReceptorDNA-Binding ProteinsHomeodomain ProteinsNanog Homeobox ProteinNanog protein, mouseNR0B1 protein, humanNr0b1 protein, mouseOctamer Transcription Factor-3Pou5f1 protein, mouseReceptors, Retinoic AcidRecombinant Fusion ProteinsRepressor Proteins

Identifiers

PMID19528230
PMCPMC2725734
OpenAlexW2157825799

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.