Evidence map›Paper›PMID 20405120›Full record

ArticleImmunogenetics2010

Suppressive effects of transcription factor GATA-1 on cell type-specific gene expression in dendritic cells.

Naomi Shimokawa, Chiharu Nishiyama, Nobuhiro Nakano, Keiko Maeda, Ryuyo Suzuki, Mutsuko Hara, Tatsuo Fukai, Tomoko Tokura, Hiroaki Miyajima, Atsuhito Nakao and 2 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Regulation of myelopoiesis by the transcription factor IRF8.International journal of hematology · 2015
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Naomi ShimokawaAtopy (Allergy) Research Center, Juntendo University School of Medicine, 2-1-1 Hongo, Bunkyo-ku, Tokyo, 113-8421, Japan.
Chiharu Nishiyama
Nobuhiro Nakano
Keiko Maeda
Ryuyo Suzuki
Mutsuko Hara
Tatsuo Fukai
Tomoko Tokura
Hiroaki Miyajima
Atsuhito Nakao
Hideoki Ogawa
Ko Okumura
Juntendo University · JPUniversity of Yamanashi Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To evaluate the effects of the transcription factor GATA-1 on determining cell fate between dendritic cell (DC) and mast cell (MC) lineages, GATA-1 was exogenously expressed in bone marrow-derived (BM) DCs. Exogenous expression of GATA-1 by a retrovirus in BMDCs inhibited expression of CD11c, CD80, CD86, and major histocompatibility complex class II with suppression of antigen-presenting ability and morphological changes toward granulocyte-like cells. Transcription of MC proteases and c-kit was markedly upregulated by GATA-1. Expression of IRF-4 and -8 was markedly suppressed, whereas PU.1 mRNA level was not affected by GATA-1. Chromatin immunoprecipitation assay showed that recruitment of PU.1 on the IRF-8 promoter was reduced in GATA-1-expressing DCs. These results indicate that GATA-1 suppresses PU.1 function but not PU.1 transcription. Thus, GATA-1 appears to determine cell fate by regulating several cell-specific transcription factors.

Indexed as

AnimalsB7-1 AntigenB7-2 AntigenBlotting, WesternBone Marrow CellsCell DifferentiationCell LineageCells, CulturedChromatin ImmunoprecipitationDendritic CellsFlow CytometryGATA1 Transcription FactorGene Expression RegulationInterferon Regulatory Factor-8Interferon Regulatory FactorsMast CellsB7-1 AntigenB7-2 AntigenGata1 protein, mouseGATA1 Transcription FactorInterferon Regulatory Factor-8Interferon Regulatory FactorsRNA, Messenger

Identifiers

PMID20405120
OpenAlexW2031295757

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.