Evidence map›Paper›PMID 20664637›Full record

ArticleMolecular systems biology2010

Kinase/phosphatase overexpression reveals pathways regulating hippocampal neuron morphology.

William J Buchser, Tatiana I Slepak, Omar Gutierrez-Arenas, John L Bixby, Vance P Lemmon

Open access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
  2. Review
  3. Anatomical Diversity of the Adult Corticospinal Tract Revealed by Single-Cell Transcriptional Profiling.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
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  7. Inositol Polyphosphate-5-Phosphatase K (The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
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  12. The Life of a Trailing Spouse.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  13. Increasing the resolution and precision of psychiatric genome-wide association studies by re-imputing summary statistics using a large, diverse reference panel.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2021
    Review
  14. Article
  15. Article
  16. Computational Identification of Kinases That Control Axon Growth in Mouse.SLAS discovery : advancing life sciences R & D · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. PAR3-PAR6-atypical PKC polarity complex proteins in neuronal polarization.Cellular and molecular life sciences : CMLS · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

William J BuchserThe Miami Project to Cure Paralysis, Department of Pharmacology, University of Miami, Miller School of Medicine, Miami, FL 33136-1060, USA.
Tatiana I Slepak
Omar Gutierrez-Arenas
John L Bixby
Vance P Lemmon
University of Miami · US

Funding

Novel Gene Targets for CNS Axonal RegenerationR01HD057632 · NICHD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BIXBY, JOHN L, LEMMON, VANCE P · 2007 to 2018
$4.7M
PREDOCTORAL TRAINING PROGRAM IN THE NEUROSCIENCEST32NS007492 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BIXBY, JOHN L · 2001 to 2010
$1.8M
Novel Compounds That Overcome Glial Inhibition of Axonal RegenerationR01NS059866 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BIXBY, JOHN L · 2009 to 2013
$1.7M
TRAINING PROGRAM IN CNS INJURY AND REPAIRT32NS007459 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI DIETRICH, W DALTON · 2000 to 2009
$1.7M
NICHD NIH HHS HD057632NICHD NIH HHS R01 HD057632NINDS NIH HHS NS059866NINDS NIH HHS R01 NS059866NINDS NIH HHS T32 NS007459NINDS NIH HHS T32 NS007492NINDS NIH HHS T32 NS07492
6 · The paper itself

Abstract

Development and regeneration of the nervous system requires the precise formation of axons and dendrites. Kinases and phosphatases are pervasive regulators of cellular function and have been implicated in controlling axodendritic development and regeneration. We undertook a gain-of-function analysis to determine the functions of kinases and phosphatases in the regulation of neuron morphology. Over 300 kinases and 124 esterases and phosphatases were studied by high-content analysis of rat hippocampal neurons. Proteins previously implicated in neurite growth, such as ERK1, GSK3, EphA8, FGFR, PI3K, PKC, p38, and PP1a, were confirmed to have effects in our functional assays. We also identified novel positive and negative neurite growth regulators. These include neuronal-developmentally regulated kinases such as the activin receptor, interferon regulatory factor 6 (IRF6) and neural leucine-rich repeat 1 (LRRN1). The protein kinase N2 (PKN2) and choline kinase alpha (CHKA) kinases, and the phosphatases PPEF2 and SMPD1, have little or no established functions in neuronal function, but were sufficient to promote neurite growth. In addition, pathway analysis revealed that members of signaling pathways involved in cancer progression and axis formation enhanced neurite outgrowth, whereas cytokine-related pathways significantly inhibited neurite formation.

Indexed as

Cell ShapeNerve RegenerationSignal TransductionAnimalsCells, CulturedGene Expression Regulation, DevelopmentalGene Regulatory NetworksGenotypeHippocampusHumansMiceNeuronsPhenotypePhosphoprotein PhosphatasesProtein KinasesRatsPhosphoprotein PhosphatasesProtein Kinases

Identifiers

PMID20664637
PMCPMC2925531
OpenAlexW2160712706

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.