Evidence map›Paper›PMID 20937907›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Structural characterization of a beta-turn mimic within a protein-protein interface.

Björn Eckhardt, Wolfgang Grosse, Lars-Oliver Essen, Armin Geyer

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Tryptophan Analogues with Fixed Side-Chain Orientation: Expanding the Scope.Chembiochem : a European journal of chemical biology · 2021
    Article
  10. Review
  11. Article
  12. Article
  13. Directed C(spChemical science · 2019
    Article
  14. Proteomics for cancer drug design.Expert review of proteomics · 2019
    Article
  15. Article
  16. Article
  17. Article
  18. Engineering β-sheets employingChemical science · 2016
    Article
  19. Article
  20. Cadmium-cysteine coordination in the BK inner pore region and its structural and functional implications.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Björn EckhardtFachbereich Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse, D-35032 Marburg, Germany.
Wolfgang Grosse
Lars-Oliver Essen
Armin Geyer

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

β-Turns are secondary structure elements not only exposed on protein surfaces, but also frequently found to be buried in protein-protein interfaces. Protein engineering so far considered mainly the backbone-constraining properties of synthetic β-turn mimics as parts of surface-exposed loops. A β-turn mimic, Hot═Tap, that is available in gram amounts, provides two hydroxyl groups that enhance its turn-inducing properties besides being able to form side-chain-like interactions. NMR studies on cyclic hexapeptides harboring the Hot═Tap dipeptide proved its strong β-turn-inducing capability. Crystallographic analyses of the trimeric fibritin-foldon/Hot═Tap hybrid reveal at atomic resolution how Hot═Tap replaces a βI'-turn by a βII'-type structure. Furthermore, Hot═Tap adapts to the complex protein environment by participating in several direct and water-bridged interactions across the foldon trimer interface. As building blocks, β-turn mimics capable of both backbone and side-chain mimicry may simplify the design of synthetic proteins.

Indexed as

Crystallography, X-RayModels, MolecularMolecular MimicryNuclear Magnetic Resonance, BiomolecularOligopeptidesProtein EngineeringProtein Interaction Domains and MotifsProteinsProtein Structure, SecondaryRecombinant Fusion ProteinsViral Proteinsfibritin protein, Enterobacteria phage T4OligopeptidesProteinsRecombinant Fusion ProteinsViral Proteins

Identifiers

PMID20937907
PMCPMC2972999

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.