Evidence map›Paper›PMID 20970388›Full record

ArticleDNA repair2011

Bi-directional routing of DNA mismatch repair protein human exonuclease 1 to replication foci and DNA double strand breaks.

Sascha E Liberti, Sofie D Andersen, Jing Wang, Alfred May, Simona Miron, Mylene Perderiset, Guido Keijzers, Finn C Nielsen, Jean-Baptiste Charbonnier, Vilhelm A Bohr and 1 more

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  4. Unorthodox PCNA Binding by Chromatin Assembly Factor 1.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Sascha E LibertiCenter for Healthy Aging, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark.
Sofie D Andersen
Jing Wang
Alfred May
Simona Miron
Mylene Perderiset
Guido Keijzers
Finn C Nielsen
Jean-Baptiste Charbonnier
Vilhelm A Bohr
Lene J Rasmussen
Institut Curie · FRNational Institute on Aging · USRoskilde University · DKUniversity of Copenhagen · DKCentre National de la Recherche Scientifique · FRCopenhagen University Hospital · DK

Funding

Function of RecQ helicases in genome stabilityZIAAG000726 · NIA · NATIONAL INSTITUTE ON AGING · PI BROSH, ROBERT · 2009 to 2025
$13.1M
Oxidative DNA Damage And Its ProcessingZIAAG000727 · NIA · NATIONAL INSTITUTE ON AGING · PI FERRUCCI, LUIGI · 2009 to 2022
$8.4M
The Function of Werner Syndrome ProteinZIAAG000721 · NIA · NATIONAL INSTITUTE ON AGING · PI FERRUCCI, LUIGI · 2009 to 2022
$7.7M
Intramural NIH HHS ZIA AG000721Intramural NIH HHS ZIA AG000726
6 · The paper itself

Abstract

Human exonuclease 1 (hEXO1) is implicated in DNA metabolism, including replication, recombination and repair, substantiated by its interactions with PCNA, DNA helicases BLM and WRN, and several DNA mismatch repair (MMR) proteins. We investigated the sub-nuclear localization of hEXO1 during S-phase progression and in response to laser-induced DNA double strand breaks (DSBs). We show that hEXO1 and PCNA co-localize in replication foci. This apparent interaction is sustained throughout S-phase. We also demonstrate that hEXO1 is rapidly recruited to DNA DSBs. We have identified a PCNA interacting protein (PIP-box) region on hEXO1 located in its COOH-terminal ((788)QIKLNELW(795)). This motif is essential for PCNA binding and co-localization during S-phase. Recruitment of hEXO1 to DNA DSB sites is dependent on the MMR protein hMLH1. We show that two distinct hMLH1 interaction regions of hEXO1 (residues 390-490 and 787-846) are required to direct the protein to the DNA damage site. Our results reveal that protein domains in hEXO1 in conjunction with specific protein interactions control bi-directional routing of hEXO1 between on-going DNA replication and repair processes in living cells.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid MotifsAmino Acid SubstitutionAnimalsDNADNA-Binding ProteinsDNA Breaks, Double-StrandedDNA Mismatch RepairDNA Repair EnzymesDNA ReplicationExodeoxyribonucleasesHeLa CellsHumansLasersMiceMutL Protein Homolog 1Adaptor Proteins, Signal TransducingBloom syndrome proteinDNADNA-Binding ProteinsDNA Repair EnzymesEXO1 protein, humanExodeoxyribonucleasesMLH1 protein, humanMSH3 protein, humanMutL Protein Homolog 1MutS Homolog 3 ProteinNuclear ProteinsProliferating Cell Nuclear AntigenRecombinant Fusion ProteinsRecQ HelicasesWerner Syndrome HelicaseWRN protein, human

Identifiers

PMID20970388
PMCPMC4586255
OpenAlexW2115433677

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.