Evidence map›Paper›PMID 21104141›Full record

ArticleMolecular biology reports2011

A global genomic view on LNX siRNA-mediated cell cycle arrest.

Dan Zheng, Shaohua Gu, Yao Li, Chaoneng Ji, Yi Xie, Yumin Mao

Abstract read
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In one paragraph

Article in Molecular biology reports, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Cancers · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Dan ZhengState Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Science, Fudan University, Shanghai, 200433, People's Republic of China.
Shaohua Gu
Yao Li
Chaoneng Ji
Yi Xie
Yumin Mao
State Key Laboratory of Genetic EngineeringFudan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LNX protein is the first described PDZ domain-containing member of the RING finger-type E3 ubiquitin ligase family. Studies have approved that LNX could participate in signal transduction, such as Notch pathway, and play an important role in tumorigenesis. In this study, we found that down-regulation of LNX resulted in G0/G1 cell cycle arrest in G0/G1 phase in HEK293 cells. To explore the molecular mechanism of this phenomenon, we employed expression microarray to comparatively analyze the genome-wide expression between the LNX-knockdown cells and the normal cells. We also used quantitative real-time PCR to further confirm the differential expression patterns of 25 transcripts involved in cell cycle. Combined with known information about genic functions, signal pathways and cell cycle machinery, we analyzed the role of endogenous LNX in cell cycle. The results suggest that down-regulation of LNX could result in cell cycle arrest in G0/G1 phase through inhibition of β-catenin, MAPK, NFκB, c-Myc-dependent pathway and activation of p53, TGF-β-dependent pathway. This study provides new perspectives on LNX's pleiotropic activities, especially its essential role in cell proliferation and cell cycle.

Indexed as

beta CateninCell CycleCell LineDNA PrimersGene Expression ProfilingGene Expression RegulationGene Knockdown TechniquesGenetic VectorsHumansMitogen-Activated Protein KinasesNF-kappa BOligonucleotide Array Sequence AnalysisOligonucleotidesReverse Transcriptase Polymerase Chain ReactionRNA, Small InterferingSignal Transductionbeta CateninDNA PrimersLNX1 protein, humanMitogen-Activated Protein KinasesNF-kappa BOligonucleotidesRNA, Small InterferingTransforming Growth Factor betaTumor Suppressor Protein p53Ubiquitin-Protein Ligases

Identifiers

PMID21104141
OpenAlexW1995076981

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.