Evidence map›Paper›PMID 21187014›Full record

ArticleBMC plant biology2010

A var2 leaf variegation suppressor locus, SUPPRESSOR OF VARIEGATION3, encodes a putative chloroplast translation elongation factor that is important for chloroplast development in the cold.

Xiayan Liu, Steve R Rodermel, Fei Yu

Abstract read
In one paragraph

Article in BMC plant biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

3 authors.

Xiayan LiuCollege of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, People's Republic of China.
Steve R Rodermel
Fei Yu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Arabidopsis var2 mutant displays a unique green and white/yellow leaf variegation phenotype and lacks VAR2, a chloroplast FtsH metalloprotease. We are characterizing second-site var2 genetic suppressors as means to better understand VAR2 function and to study the regulation of chloroplast biogenesis.

resultsIn this report, we show that the suppression of var2 variegation in suppressor line TAG-11 is due to the disruption of the SUPPRESSOR OF VARIEGATION3 (SVR3) gene, encoding a putative TypA-like translation elongation factor. SVR3 is targeted to the chloroplast and svr3 single mutants have uniformly pale green leaves at 22°C. Consistent with this phenotype, most chloroplast proteins and rRNA species in svr3 have close to normal accumulation profiles, with the notable exception of the Photosystem II reaction center D1 protein, which is present at greatly reduced levels. When svr3 is challenged with chilling temperature (8°C), it develops a pronounced chlorosis that is accompanied by abnormal chloroplast rRNA processing and chloroplast protein accumulation. Double mutant analysis indicates a possible synergistic interaction between svr3 and svr7, which is defective in a chloroplast pentatricopeptide repeat (PPR) protein.

conclusionsOur findings, on one hand, reinforce the strong genetic link between VAR2 and chloroplast translation, and on the other hand, point to a critical role of SVR3, and possibly some aspects of chloroplast translation, in the response of plants to chilling stress.

Indexed as

Cold TemperatureAllelesArabidopsisArabidopsis ProteinsATP-Dependent ProteasesChloroplastsImmunoblottingMembrane ProteinsMutationPeptide Elongation FactorsPhenotypePhylogenyReverse Transcriptase Polymerase Chain ReactionRNA, ChloroplastRNA, RibosomalArabidopsis ProteinsAT2G30950 protein, ArabidopsisATP-Dependent ProteasesMembrane ProteinsPeptide Elongation FactorsRNA, ChloroplastRNA, RibosomalSVR3 protein, Arabidopsis

Identifiers

PMID21187014
PMCPMC3022910

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.