Evidence map›Paper›PMID 21858141›Full record

ArticlePloS one2011

AP-2δ is a crucial transcriptional regulator of the posterior midbrain.

Katrin Hesse, Kristina Vaupel, Simone Kurt, Reinhard Buettner, Jutta Kirfel, Markus Moser

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

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  4. Frontiers in cell and developmental biology · 2024
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  16. Overlapping expression patterns and redundant roles for AP-2 transcription factors in the developing mammalian retina.Developmental dynamics : an official publication of the American Association of Anatomists · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Katrin HesseInstitute of Pathology, University of Bonn, Bonn, Germany.
Kristina Vaupel
Simone Kurt
Reinhard Buettner
Jutta Kirfel
Markus Moser
Max Planck Institute of Biochemistry · DEUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ap-2 transcription factors comprise a family of 5 closely related sequence-specific DNA binding proteins that play pivotal and non-redundant roles in embryonic organogenesis. To investigate the function of Ap-2δ, wδe analyzed its expression during embryogenesis and generated Ap-2δ-deficient mice. In line with the specific expression pattern of Ap-2δ in the mesencephalic tectum and the dorsal midbrain, Ap-2δ-deficient mice failed to maintain the colliculus inferior, a derivative of the dorsal midbrain, as a consequence of increased apoptotic cell death. To identify specific Ap-2δ target genes in cells of the developing dorsal midbrain, we performed whole genome analysis of cDNA expression levels. This approach identified a set of 12 putative target genes being expressed in the developing midbrain, including the transcription factors Pitx2, Mef2c, Bhlhb4 and Pou4f3. Using chromatin immunoprecipitation (CHIP) we showed that some of these genes are direct targets of Ap-2δ. Consistently, we demonstrate that Ap-2δ occupies and activates the Pou4f3 and Bhlhb4 promoters. In addition, known Pou4f3 target genes were downregulated in the posterior midbrain of Ap-2δ-deficient mice. Despite the absence of a central part of the auditory pathway, the presence of neuronal responses to sounds in the neocortex of Ap-2δ-deficient mice indicates that auditory information from the brainstem still reaches the neocortex. In summary, our data define Ap-2δ as an important transcription factor, specifying gene expression patterns required for the development of the posterior midbrain.

Indexed as

Gene Expression ProfilingGene Expression Regulation, DevelopmentalAnimalsApoptosisBasic Helix-Loop-Helix ProteinsBinding SitesCell Line, TumorChromatin ImmunoprecipitationEmbryo, MammalianEvoked PotentialsHomeodomain ProteinsInferior ColliculiIn Situ HybridizationMesencephalonMiceMice, KnockoutBasic Helix-Loop-Helix ProteinsBhlhb4 protein, mouseHomeodomain ProteinsPou4f3 protein, mouseTranscription Factor AP-2Transcription Factor Brn-3C

Identifiers

PMID21858141
PMCPMC3153493
OpenAlexW2149567779

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.