Evidence map›Paper›PMID 22080598›Full record

ArticleThe Plant cell2011

Transcriptional regulation of Arabidopsis LEAFY COTYLEDON2 involves RLE, a cis-element that regulates trimethylation of histone H3 at lysine-27.

Nathalie Berger, Bertrand Dubreucq, François Roudier, Christian Dubos, Loïc Lepiniec

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
11.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 126 citations in OpenAlex.

  1. Review
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  8. Review
  9. Identifying aPeerJ · 2024
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  10. BASIC PENTACYSTEINE1 regulatesFrontiers in plant science · 2024
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  11. Epigenetics · 2023
    Review
  12. Article
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  18. Review
  19. Review
  20. Molecular Determinants ofFrontiers in plant science · 2022
    Review

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Nathalie BergerInstitut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318 Institut National de la Recherche Agronomique-Agro-ParisTech, Saclay Plant Sciences, 78026 Versailles cedex, France.
Bertrand Dubreucq
François Roudier
Christian Dubos
Loïc Lepiniec
AgroParisTech · FRInserm · FRInstitut Jean-Pierre Bourgin · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LEAFY COTYLEDON2 (LEC2) is a master regulator of seed development in Arabidopsis thaliana. In vegetative organs, LEC2 expression is negatively regulated by Polycomb Repressive Complex2 (PRC2) that catalyzes histone H3 Lys 27 trimethylation (H3K27me3) and plays a crucial role in developmental phase transitions. To characterize the cis-regulatory elements involved in the transcriptional regulation of LEC2, molecular dissections and functional analyses of the promoter region were performed in vitro, both in yeast and in planta. Two cis-activating elements and a cis-repressing element (RLE) that is required for H3K27me3 marking were characterized. Remarkably, insertion of the RLE cis-element into pF3H, an unrelated promoter, is sufficient for repressing its transcriptional activity in different tissues. Besides improving our understanding of LEC2 regulation, this study provides important new insights into the mechanisms underlying H3K27me3 deposition and PRC2 recruitment at a specific locus in plants.

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceGene Expression Regulation, PlantHistonesLysineMolecular Sequence DataPromoter Regions, GeneticRegulatory Sequences, Ribonucleic AcidSeedsTranscription FactorsArabidopsis ProteinsHistonesLEC2 protein, ArabidopsisLysineRegulatory Sequences, Ribonucleic AcidTranscription Factors

Identifiers

PMID22080598
PMCPMC3246333
OpenAlexW2111866852

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.