Evidence map›Paper›PMID 22389365›Full record

ArticleApplied and environmental microbiology2012

Identification of potential type III secretion proteins via heterologous expression of Vibrio parahaemolyticus DNA.

Xiaohui Zhou, Seth D Nydam, Jeffrey E Christensen, Michael E Konkel, Lisa Orfe, Patrick Friel, Douglas R Call

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Xiaohui ZhouDepartment of Veterinary Microbiology and Pathology, Washington State University, Pullman, Washington, USA.
Seth D Nydam
Jeffrey E Christensen
Michael E Konkel
Lisa Orfe
Patrick Friel
Douglas R Call
Washington State University · US

Funding

TRAINING IN BIOTECHNOLOGY: EMPHASIS ON PROTEIN CHEMISTRYT32GM008336 · NIGMS · WASHINGTON STATE UNIVERSITY · PI CALL, DOUGLAS R. · 1989 to 2023
$8.9M
Infectious Diseases and Microbial Immunology Training ProgramT32AI007025 · NIAID · WASHINGTON STATE UNIVERSITY · PI Thomas H KAWULA, M KARIUKI NJENGA · 1985 to 2026
$7.4M
FOOD &WATERBORNE DISEASES INTEGRATED RESEARCH NETWORK, ZOONOES RESEAR-N01AI030055 · NIAID · WASHINGTON STATE UNIVERSITY · 2003 to 2003
–
NIAID NIH HHS N01 AI030055NIAID NIH HHS T32 AI007025NIGMS NIH HHS T32 GM008336
6 · The paper itself

Abstract

We employed a heterologous secretion assay to identify proteins potentially secreted by type III secretion systems (T3SSs) in Vibrio parahaemolyticus. N-terminal sequences from 32 proteins within T3SS genomic islands and seven proteins from elsewhere in the chromosome included proteins that were recognized for export by the Yersinia enterocolitica flagellar T3SS.

Indexed as

Bacterial ProteinsBacterial Secretion SystemsDNA, BacterialGene ExpressionMolecular Sequence DataRecombinant ProteinsSequence Analysis, DNAVibrio parahaemolyticusYersinia enterocoliticaBacterial ProteinsBacterial Secretion SystemsDNA, BacterialRecombinant Proteins

Identifiers

PMID22389365
PMCPMC3346465
OpenAlexW2121626228

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.