Evidence map›Paper›PMID 22613834›Full record

ArticleThe Journal of cell biology2012

Stoichiometry of Nck-dependent actin polymerization in living cells.

Jonathon A Ditlev, Paul J Michalski, Greg Huber, Gonzalo M Rivera, William A Mohler, Leslie M Loew, Bruce J Mayer

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 82 citations in OpenAlex.

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  14. Programmable DNA-augmented hydrogels for controlled activation of human lymphocytes.Nanomedicine : nanotechnology, biology, and medicine · 2021
    Article
  15. Nck adaptors at a glance.Journal of cell science · 2021
    Article
  16. Article
  17. Article
  18. Biomolecular condensates in membrane receptor signaling.Current opinion in cell biology · 2021
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jonathon A DitlevDepartment of Genetics and Developmental Biology, Raymond and Beverly Sackler Laboratory of Genetics and Molecular Medicine, and Richard D Berlin Center for Cell Analysis & Modeling, University of Connecticut Health Center, Farmington, CT 06030, USA.
Paul J Michalski
Greg Huber
Gonzalo M Rivera
William A Mohler
Leslie M Loew
Bruce J Mayer
Génétique et biologie du développementUConn Health · USTexas A&M University · US

Funding

STRUCTUREU54GM064346 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HORWITZ, ALAN F. "RICK" · 2001 to 2010
$74.9M
VIRTUAL FCSP41RR013186 · NCRR · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI LOEW, LESLIE M · 1998 to 2011
$14.2M
POLARITY IN NETWORKS AND PATHWAYS(RMI)U54RR022232 · NCRR · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI LOEW, LESLIE M · 2005 to 2009
$12.9M
TR&D4 Spatial Modeling: Modeling Framework for Cell MotilityP41GM103313 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI LOEW, LESLIE M · 2012 to 2018
$9.7M
Functional Role of NCK and CRK Binding InteractionsR01CA082258 · NCI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI MAYER, BRUCE J. · 1999 to 2012
$4.2M
SPINNING MICROLENS CONFOCAL MICROSCOPE: CELL &MOLECULARBIOLOGY: PROTEINS10RR019428 · NCRR · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI MOHLER, WILLIAM A · 2004 to 2004
$206k
NCI NIH HHS R01 CA082258NCI NIH HHS R01 CA82258NCRR NIH HHS 1S10RR019428-01NCRR NIH HHS 2P41RR013186-15NCRR NIH HHS P41 RR013186NCRR NIH HHS S10 RR019428NCRR NIH HHS U54 RR022232NIDDK NIH HHS TR01DK087660NIGMS NIH HHS P41 GM103313NIGMS NIH HHS U54 GM064346
6 · The paper itself

Abstract

Regulation of actin dynamics through the Nck/N-WASp (neural Wiskott-Aldrich syndrome protein)/Arp2/3 pathway is essential for organogenesis, cell invasiveness, and pathogen infection. Although many of the proteins involved in this pathway are known, the detailed mechanism by which it functions remains undetermined. To examine the signaling mechanism, we used a two-pronged strategy involving computational modeling and quantitative experimentation. We developed predictions for Nck-dependent actin polymerization using the Virtual Cell software system. In addition, we used antibody-induced aggregation of membrane-targeted Nck SH3 domains to test these predictions and to determine how the number of molecules in Nck aggregates and the density of aggregates affected localized actin polymerization in living cells. Our results indicate that the density of Nck molecules in aggregates is a critical determinant of actin polymerization. Furthermore, results from both computational simulations and experimentation support a model in which the Nck/N-WASp/Arp2/3 stoichiometry is 4:2:1. These results provide new insight into activities involving localized actin polymerization, including tumor cell invasion, microbial pathogenesis, and T cell activation.

Indexed as

PolymerizationActinsAdaptor Proteins, Signal TransducingCell SurvivalComputer SimulationHEK293 CellsHumansOncogene ProteinsSignal Transductionsrc Homology DomainsActinsAdaptor Proteins, Signal TransducingNck proteinOncogene Proteins

Identifiers

PMID22613834
PMCPMC3365498
OpenAlexW2113924585

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.