Evidence map›Paper›PMID 23133593›Full record

ArticlePloS one2012

Conformations of islet amyloid polypeptide monomers in a membrane environment: implications for fibril formation.

Mojie Duan, Jue Fan, Shuanghong Huo

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mojie DuanGustaf H. Carlson School of Chemistry and Biochemistry, Clark University, Worcester, Massachusetts, United States of America.
Jue Fan
Shuanghong Huo

Funding

Study protein folding mechanism using a roadmap-based approachR01GM088326 · NIGMS · CLARK UNIVERSITY (WORCESTER, MA) · PI HUO, SHUANGHONG · 2009 to 2013
$1.2M
NIGMS NIH HHS 1R01-GM088326NIGMS NIH HHS R01 GM088326
6 · The paper itself

Abstract

The amyloid fibrils formed by islet amyloid polypeptide (IAPP) are associated with type II diabetes. One of the proposed mechanisms of the toxicity of IAPP is that it causes membrane damage. The fatal mutation of S20G human IAPP was reported to lead to early onset of type II diabetes and high tendency of amyloid formation in vitro. Characterizing the structural features of the S20G mutant in its monomeric state is experimentally difficult because of its unusually fast aggregation rate. Computational work complements experimental studies. We performed a series of molecular dynamics simulations of the monomeric state of human variants in the membrane. Our simulations are validated by extensive comparisons with experimental data. We find that a helical disruption at His18 is common to both human variants. An L-shaped motif of S20G mutant is observed in one of the conformational families. This motif that bends at His18 resembles the overall topology of IAPP fibrils. The conformational preorganization into the fibril-like topology provides a possible explanation for the fast aggregation rate of S20G IAPP.

Indexed as

AmyloidCell MembraneComputer SimulationDisulfidesHumansIslet Amyloid PolypeptideIslets of LangerhansLipid BilayersLipidsMolecular Dynamics SimulationMutationPeptidesPhosphatidylcholinesPhosphatidylserinesProtein ConformationProteins1,2-dioleoylphosphatidylserine1,2-oleoylphosphatidylcholineAmyloidDisulfidesIslet Amyloid PolypeptideLipid BilayersLipidsPeptidesPhosphatidylcholinesPhosphatidylserinesProteins

Identifiers

PMID23133593
PMCPMC3487734

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.