Evidence map›Paper›PMID 23404109›Full record

ArticleDevelopment (Cambridge, England)2013

Functional dissection of the paired domain of Pax6 reveals molecular mechanisms of coordinating neurogenesis and proliferation.

Tessa Walcher, Qing Xie, Jian Sun, Martin Irmler, Johannes Beckers, Timucin Öztürk, Dierk Niessing, Anastassia Stoykova, Ales Cvekl, Jovica Ninkovic and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 73 citations in OpenAlex.

  1. Review
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  3. Article
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  5. Review
  6. Review
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  11. Review
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  15. Multiple Functions of theFrontiers in neuroscience · 2021
    Review
  16. Article
  17. Cell trackingBiology open · 2018
    Article
  18. Article
  19. Article
  20. Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Tessa WalcherInstitute of Stem Cell Research, Helmholtz Center Munich, 85764 Neuherberg-Munich, Germany.
Qing Xie
Jian Sun
Martin Irmler
Johannes Beckers
Timucin Öztürk
Dierk Niessing
Anastassia Stoykova
Ales Cvekl
Jovica Ninkovic
Magdalena Götz
Albert Einstein College of Medicine · USWeihenstephan-Triesdorf University of Applied Sciences · DE

Funding

PAX-6 AS A KEY REGULATOR OF LENS DEVELOPMENTR01EY012200 · NEI · YESHIVA UNIVERSITY · PI CVEKL, ALES · 2000 to 2025
$13.1M
Analysis of transcription in lens using tiled microarrays (ChIP on chip)R21EY017296 · NEI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI CVEKL, ALES · 2006 to 2007
$383k
NEI NIH HHS EY012200NEI NIH HHS R01 EY012200NEI NIH HHS R21 EY017296
6 · The paper itself

Abstract

To achieve adequate organ development and size, cell proliferation and differentiation have to be tightly regulated and coordinated. The transcription factor Pax6 regulates patterning, neurogenesis and proliferation in forebrain development. The molecular basis of this regulation is not well understood. As the bipartite DNA-binding paired domain of Pax6 regulates forebrain development, we examined mice with point mutations in its individual DNA-binding subdomains PAI (Pax6(Leca4), N50K) and RED (Pax6(Leca2), R128C). This revealed distinct roles in regulating proliferation in the developing cerebral cortex, with the PAI and RED subdomain mutations reducing and increasing, respectively, the number of mitoses. Conversely, neurogenesis was affected only by the PAI subdomain mutation, phenocopying the neurogenic defects observed in full Pax6 mutants. Genome-wide expression profiling identified molecularly discrete signatures of Pax6(Leca4) and Pax6(Leca2) mutations. Comparison to Pax6 targets identified by chromatin immunoprecipitation led to the identification and functional characterization of distinct DNA motifs in the promoters of target genes dysregulated in the Pax6(Leca2) or Pax6(Leca4) mutants, further supporting the distinct regulatory functions of the DNA-binding subdomains. Thus, Pax6 achieves its key roles in the developing forebrain by utilizing particular subdomains to coordinate patterning, neurogenesis and proliferation simultaneously.

Indexed as

Cell ProliferationAnimalsAnimals, Genetically ModifiedBody PatterningEmbryo, MammalianEye ProteinsHomeodomain ProteinsMiceMice, Inbred C57BLMice, Inbred DBAModels, BiologicalMutagenesis, Site-DirectedNeurogenesisPaired Box Transcription FactorsPAX6 Transcription FactorProsencephalonEye ProteinsHomeodomain ProteinsPaired Box Transcription FactorsPax6 protein, mousePAX6 Transcription FactorRepressor Proteins

Identifiers

PMID23404109
PMCPMC3583046
OpenAlexW2094166643

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.