Evidence map›Paper›PMID 23612977›Full record

ArticleThe Journal of biological chemistry2013

NHERF2 protein mobility rate is determined by a unique C-terminal domain that is also necessary for its regulation of NHE3 protein in OK cells.

Jianbo Yang, Varsha Singh, Boyoung Cha, Tian-E Chen, Rafiquel Sarker, Rakhilya Murtazina, Shi Jin, Nicholas C Zachos, George H Patterson, C Ming Tse and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Phosphorylation of NHE3-SMolecular biology of the cell · 2017
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Traditional and emerging roles for the SLC9 Na+/H+ exchangers.Pflugers Archiv : European journal of physiology · 2014
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Jianbo YangDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Varsha SinghDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Boyoung ChaDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Tian-E ChenDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Rafiquel SarkerDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Rakhilya MurtazinaDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Shi JinDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Nicholas C ZachosDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
George H PattersonBiophotonics Section, National Institute of Biomedical Imaging and Bioengineering, NIH, Bethesda, Maryland 20892.
C Ming TseDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Olga KovbasnjukDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Xuhang LiDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205.
Mark DonowitzDepartment of Medicine, Division of Gastroenterology, Baltimore, Maryland 21205; Department of Physiology, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21205. Electronic address: mdonowit@jhmi.edu.
Johns Hopkins University · USNational Institute of Biomedical Imaging and Bioengineering · US

Funding

Two-Photon Microscopy Imaging CoreP01DK072084 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI DONOWITZ, MARK · 2006 to 2013
$12.7M
Translational Research Enhancement CoreP30DK089502 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI ZACHOS, NICHOLAS CONSTANTINE · 2011 to 2020
$12.0M
BiophotonicsZIAEB000071 · NIBIB · NATIONAL INSTITUTE OF BIOMEDICAL IMAGING AND BIOENGINEERING · PI PATTERSON, GEORGE · 2010 to 2022
$9.7M
DIARRHEAL DISEASES: A PHYSIOLOGIC APPROACH TO TREATMENTR01DK026523 · NIDDK · TUFTS MEDICAL CENTER · PI DONOWITZ, MARK · 1986 to 2016
$7.8M
PDZ Domain Proteins and NHE3 RegulationR01DK061765 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI DONOWITZ, MARK, TSE, CHUNG-MING · 2004 to 2013
$4.7M
NHE3 Polymorphisms and Chronic Diarrheal DiseasesK08DK088950 · NIDDK · ALBANY MEDICAL COLLEGE · PI ZHU, XINJUN · 2010 to 2014
$691k
NIDDK NIH HHS K08 DK088950NIDDK NIH HHS K08DK088950NIDDK NIH HHS P01 DK072084NIDDK NIH HHS P01DK072084NIDDK NIH HHS P30 DK089502NIDDK NIH HHS P30DK089502NIDDK NIH HHS R01 DK026523NIDDK NIH HHS R01 DK061765NIDDK NIH HHS R01DK26523NIDDK NIH HHS R01DK61765
6 · The paper itself

Abstract

Na(+)/H(+) exchanger regulatory factor (NHERF) proteins are a family of PSD-95/Discs-large/ZO-1 (PDZ)-scaffolding proteins, three of which (NHERFs 1-3) are localized to the brush border in kidney and intestinal epithelial cells. All NHERF proteins are involved in anchoring membrane proteins that contain PDZ recognition motifs to form multiprotein signaling complexes. In contrast to their predicted immobility, NHERF1, NHERF2, and NHERF3 were all shown by fluorescence recovery after photobleaching/confocal microscopy to be surprisingly mobile in the microvilli of the renal proximal tubule OK cell line. Their diffusion coefficients, although different among the three, were all of the same magnitude as that of the transmembrane proteins, suggesting they are all anchored in the microvilli but to different extents. NHERF3 moves faster than NHERF1, and NHERF2 moves the slowest. Several chimeras and mutants of NHERF1 and NHERF2 were made to determine which part of NHERF2 confers the slower mobility rate. Surprisingly, the slower mobility rate of NHERF2 was determined by a unique C-terminal domain, which includes a nonconserved region along with the ezrin, radixin, moesin (ERM) binding domain. Also, this C-terminal domain of NHERF2 determined its greater detergent insolubility and was necessary for the formation of larger multiprotein NHERF2 complexes. In addition, this NHERF2 domain was functionally significant in NHE3 regulation, being necessary for stimulation by lysophosphatidic acid of activity and increased mobility of NHE3, as well as necessary for inhibition of NHE3 activity by calcium ionophore 4-Br-A23187. Thus, multiple functions of NHERF2 require involvement of an additional domain in this protein.

Indexed as

AnimalsCaco-2 CellsCalcimycinCalcium IonophoresCytoskeletal ProteinsHumansKidney Tubules, ProximalLysophospholipidsMultiprotein ComplexesPhosphoproteinsProtein Structure, TertiaryProtein TransportRabbitsRatsSodium-Hydrogen Exchanger 3Sodium-Hydrogen Exchangers4-bromo-A-23187CalcimycinCalcium IonophoresCytoskeletal Proteinslysophosphatidic acidLysophospholipidsMultiprotein ComplexesPhosphoproteinsSLC9A3 protein, humanSlc9a3 protein, ratSlc9a3r2 protein, ratSodium-Hydrogen Exchanger 3sodium-hydrogen exchanger regulatory factorSodium-Hydrogen ExchangersEpithelial CellExocytosisMobilityScaffold ProteinsSodium Proton ExchangeTrafficking

Identifiers

PMID23612977
PMCPMC3675628
OpenAlexW2039874368

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.