Evidence map›Paper›PMID 23771106›Full record

ArticleRNA biology2013

Function of PPR proteins in plastid gene expression.

Toshiharu Shikanai, Sota Fujii

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular breeding : new strategies in plant improvement · 2024
    Article
  4. Review
  5. International journal of molecular sciences · 2022
    Article
  6. Article
  7. Article
  8. Review
  9. Maize kernel development.Molecular breeding : new strategies in plant improvement · 2021
    Review
  10. Review
  11. Article
  12. The Enigmatic Roles of PPR-SMR Proteins in Plants.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2019
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. LOW PHOTOSYNTHETIC EFFICIENCY 1 is required for light-regulated photosystem II biogenesis inProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 2 countries.

Toshiharu ShikanaiGraduate School of Science; Kyoto University; Kyoto, Japan.
Sota FujiiGraduate School of Science; Kyoto University; Kyoto, Japan.
Graduate School USA · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PPR proteins form a huge family in flowering plants and are involved in RNA maturation in plastids and mitochondria. These proteins are sequence-specific RNA-binding proteins that recruit the machinery of RNA processing. We summarize progress in the research on the functional mechanisms of divergent RNA maturation and on the mechanism by which RNA sequences are recognized. We further focus on two topics. RNA editing is an enigmatic process of RNA maturation in organelles, in which members of the PLS subfamily contribute to target site recognition. As the first topic, we speculate on why the PLS subfamily was selected by the RNA editing machinery. Second, we discuss how the regulation of plastid gene expression contributes to efficient photosynthesis. Although the molecular functions of PPR proteins have been studied extensively, information on the physiological significance of regulation by these proteins remains very limited.

Indexed as

Gene Expression Regulation, PlantRNA EditingArabidopsis ProteinsCarrier ProteinsChloroplastsMembrane ProteinsMutationOrganellesPhotosynthesisPlant ProteinsPlastidsProtein ConformationProtein Structure, TertiaryRNA-Binding ProteinsRNA, PlantArabidopsis ProteinsCarrier ProteinsCRR3 protein, ArabidopsisCRR4 protein, ArabidopsisMembrane ProteinsPGR3 protein, ArabidopsisPlant ProteinsRNA-Binding ProteinsRNA, PlantchloroplastphotosynthesisPPRRNARNA editing

Identifiers

PMID23771106
PMCPMC3858428
OpenAlexW2074579913

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.