Evidence map›Paper›PMID 23895657›Full record

ArticleEpigenomics2013

Histone modifications: implications in renal cell carcinoma.

Swathi Ramakrishnan, Leigh Ellis, Roberto Pili

Open access · greenAbstract read
In one paragraph

Article in Epigenomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Epigenomics of clear cell renal cell carcinoma: mechanisms and potential use in molecular pathology.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2016
    Review
  12. Label-free quantitative proteomic analysis reveals potential biomarkers and pathways in renal cell carcinoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Swathi RamakrishnanRoswell Park Cancer Institute, Department of Cancer Pathology & Prevention, Grace Cancer Drug Center, Buffalo, NY, USA.
Leigh Ellis
Roberto Pili
Roswell Park Comprehensive Cancer Center · USGrace (United States) · US

Funding

Targeting HIF-1alpha in renal cell carcinoma: the role of HDAC inhibitorsR01CA135321 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI PILI, ROBERTO · 2008 to 2010
$1.0M
NCI NIH HHS R01 CA135321
6 · The paper itself

Abstract

In 2012, an estimated 64,770 men and women were diagnosed with malignancy of the kidney and renal pelvis, of which 13,570 succumbed to their disease. Common genetic aberrations in renal cell carcinomas (RCCs) include loss of function of the VHL gene in clear-cell RCC, overexpression of the c-MET gene in papillary RCC type I, deficiency in the FH gene in papillary RCC type II and loss of heterozygozity of the BHD gene in chromophobe RCC. Recent studies illustrate epigenetic silencing of VHL, as well as alterations in histone modifications and their governing enzymes. The possibility of reversing these epigenetic marks has resulted in efforts to target these changes by utilizing inhibitors of HDACs, DNA methyltransferases and, recently, histone methyltransferases in preclinical and clinical studies. This article focuses on potential therapeutic interventions, and the implications of histone modifications and related enzyme alterations in RCC.

Indexed as

AcetylationCarcinoma, Renal CellDNA MethylationEpigenesis, GeneticFemaleGene SilencingHistone AcetyltransferasesHistone DemethylasesHistonesHumansKidneyKidney NeoplasmsMaleMethyltransferasesPhosphorylationProto-Oncogene Proteins c-metHistone AcetyltransferasesHistone DemethylasesHistonesMethyltransferasesProto-Oncogene Proteins c-metVHL protein, humanVon Hippel-Lindau Tumor Suppressor Protein

Identifiers

PMID23895657
PMCPMC3872784
OpenAlexW2086756744

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.