Evidence map›Paper›PMID 23945238›Full record

ArticleThe Journal of clinical investigation2013

Predicting time to ovarian carcinoma recurrence using protein markers.

Ji-Yeon Yang, Kosuke Yoshihara, Kenichi Tanaka, Masayuki Hatae, Hideaki Masuzaki, Hiroaki Itamochi, Cancer Genome Atlas (TCGA) Research Network, Masashi Takano, Kimio Ushijima, Janos L Tanyi and 4 more

Erratum issuedOpen access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of clinical investigation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
12.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 68 citations in OpenAlex.

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  9. Radioproteomics in patients with ovarian cancer.The British journal of radiology · 2021
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

14 authors at 7 institutions in 2 countries.

Ji-Yeon YangDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas 77230-1402, USA.
Kosuke Yoshihara
Kenichi Tanaka
Masayuki Hatae
Hideaki Masuzaki
Hiroaki Itamochi
Cancer Genome Atlas (TCGA) Research Network
Masashi Takano
Kimio Ushijima
Janos L Tanyi
George Coukos
Yiling Lu
Gordon B Mills
Roel G W Verhaak
The University of Texas MD Anderson Cancer Center · USNiigata University · JPUniversity of Pennsylvania · USKagoshima City Hospital · JPKurume University · JPNagasaki University · JPNational Defense Medical College · JP

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DIANE BODURKA · 1985 to 2026
$290.8M
UNIVERSITY OF TEXAS MD ANDERSON SPORE IN OVARIAN CANCERP50CA083639 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BAST, ROBERT C · 1999 to 2015
$33.0M
Targeting the PI3K Signaling Pathway in Endometrial CarcinomaP50CA098258 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BODURKA, DIANE · 2003 to 2020
$32.0M
Integrative Pipeline for Analysis & Translational Application of TCGA Data (GDAC)U24CA143883 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI AKBANI, REHAN, MILLS, GORDON B. · 2009 to 2016
$10.6M
NCI NIH HHS 5 P50 CA083639-12NCI NIH HHS CA016672NCI NIH HHS CA143883NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA083639NCI NIH HHS P50 CA098258NCI NIH HHS U24 CA143883
6 · The paper itself

Abstract

Patients with ovarian cancer are at high risk of tumor recurrence. Prediction of therapy outcome may provide therapeutic avenues to improve patient outcomes. Using reverse-phase protein arrays, we generated ovarian carcinoma protein expression profiles on 412 cases from TCGA and constructed a PRotein-driven index of OVARian cancer (PROVAR). PROVAR significantly discriminated an independent cohort of 226 high-grade serous ovarian carcinomas into groups of high risk and low risk of tumor recurrence as well as short-term and long-term survivors. Comparison with gene expression-based outcome classification models showed a significantly improved capacity of the protein-based PROVAR to predict tumor progression. Identification of protein markers linked to disease recurrence may yield insights into tumor biology. When combined with features known to be associated with outcome, such as BRCA mutation, PROVAR may provide clinically useful predictions of time to tumor recurrence.

Indexed as

AdultAgedAged, 80 and overBiomarkers, TumorCarcinoma, Ovarian EpithelialCluster AnalysisDisease-Free SurvivalFemaleHumansKaplan-Meier EstimateMiddle AgedMultivariate AnalysisNeoplasm ProteinsNeoplasm Recurrence, LocalNeoplasms, Glandular and EpithelialOvarian NeoplasmsBiomarkers, TumorNeoplasm Proteins

Identifiers

PMID23945238
PMCPMC3754259
OpenAlexW2158243351

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.