Evidence map›Paper›PMID 24092460›Full record

SynthesisBrain imaging and behavior2014

Genetic analysis of quantitative phenotypes in AD and MCI: imaging, cognition and biomarkers.

Li Shen, Paul M Thompson, Steven G Potkin, Lars Bertram, Lindsay A Farrer, Tatiana M Foroud, Robert C Green, Xiaolan Hu, Matthew J Huentelman, Sungeun Kim and 15 more

Open access · hybridAbstract readSystematic Review
In one paragraph

Synthesis in Brain imaging and behavior, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 119 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
119citing papers in PubMed, 2 pooled it
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

119 citing papers in PubMed, 2 syntheses or guidelines pooled it, 177 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
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  11. MULTISCALE ESTIMATION OF MORPHOMETRICITY FOR REVEALING NEUROANATOMICAL BASIS OF COGNITIVE TRAITS.Proceedings. IEEE International Symposium on Biomedical Imaging · 2024
    Article
  12. Multivariate mediation analysis with voxel-based morphometry revealed the neurodegeneration pathways from genetic variants to Alzheimer's Disease.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2024
    Article
  13. Article
  14. Cluster Analysis of Cortical Amyloid Burden for Identifying Imaging-driven Subtypes in Mild Cognitive Impairment.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2024
    Article
  15. Article
  16. Article
  17. Fairness-Aware Class Imbalanced Learning on Multiple Subgroups.Proceedings of machine learning research · 2023
    Article
  18. Article
  19. Article
  20. Article

59 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 13 institutions in 3 countries.

Li ShenCenter for Neuroimaging and Indiana Alzheimer's Disease Center, Department of Radiology and Imaging Sciences, Indiana University School of Medicine, 355 W 16th Street, Suite 4100, Indianapolis, IN, 46202, USA, shenli@iu.edu.
Paul M Thompson
Steven G Potkin
Lars Bertram
Lindsay A Farrer
Tatiana M Foroud
Robert C Green
Xiaolan Hu
Matthew J Huentelman
Sungeun Kim
John S K Kauwe
Qingqin Li
Enchi Liu
Fabio Macciardi
Jason H Moore
Leanne Munsie
Kwangsik Nho
Vijay K Ramanan
Shannon L Risacher
David J Stone
Shanker Swaminathan
Arthur W Toga
Michael W Weiner
Andrew J Saykin
Alzheimer’s Disease Neuroimaging Initiative
Indiana University School of MedicineUniversity of California, Los Angeles · USBoston University · USBrigham and Women's Hospital · USBrigham Young University · USDartmouth College · USTranslational Genomics Research Institute · USUnited States Military Academy · USUniversity of California, Irvine · USEli Lilly (United States) · USJanssen (United States) · USUniversity of California, San Francisco · USUniversity of Milan · IT

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
Research Education ComponentP30AG010133 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI SAYKIN, ANDREW J · 1991 to 2020
$37.3M
Neuropathology CoreP30AG013846 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI KOWALL, NEIL W. · 1996 to 2020
$29.1M
UC Davis Alzheimer's Disease Core CenterP30AG010129 · NIA · UNIVERSITY OF CALIFORNIA DAVIS · PI JOHNSON, DAVID K · 1991 to 2020
$28.3M
Quality Assurance and Quality Control Project Management: Improving Submissions and Study Conduct in the Human Subjects Research Prior Approval ProcessUL1TR002529 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI MOE, SHARON M, WIEHE, SARAH ELIZABETH · 2018 to 2022
$27.2M
FUNCTION BIRNU24RR021992 · NCRR · UNIVERSITY OF CALIFORNIA-IRVINE · PI POTKIN, STEVEN G · 2006 to 2010
$25.0M
Amyloid Imaging, VMCI, and Analysis for ADNIRC2AG036535 · NIA · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI WEINER, MICHAEL W · 2009 to 2010
$23.8M
Indiana Clinical and Translational Sciences InstituteUL1TR001108 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI DENNE, SCOTT C., SHEKHAR, ANANTHA · 2013 to 2017
$23.3M
Twin StudyP60DA011015 · NIDA · UNIVERSITY OF COLORADO DENVER · PI HEWITT, JOHN K. · 1997 to 2013
$22.5M
BIO-INFORMATICS RESEARCH NETWORK COORDINATING CENTER (BIRN-CC)U24RR025736 · NCRR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KESSELMAN, CARL · 2009 to 2011
$15.0M
TR&D3: Intrinsic Surface MappingP41EB015922 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TOGA, ARTHUR W · 2012 to 2022
$14.1M
NCATS NIH HHS UL1 TR001108NCRR NIH HHS U24 RR021992NCRR NIH HHS U24 RR025736NCRR NIH HHS U24RR025736NCRR NIH HHS U24 RR21992NHGRI NIH HHS R01 HG002213NIA NIH HHS AG036535NIA NIH HHS AG040060NIA NIH HHS K01 AG030514NIA NIH HHS K24 AG027841NIA NIH HHS P30 AG010129NIA NIH HHS P30 AG010133NIA NIH HHS P30 AG013846NIA NIH HHS P30 AG10133NIA NIH HHS R01 AG019771NIA NIH HHS R01 AG040060NIA NIH HHS R01 AG042611NIA NIH HHS R01AG19771NIA NIH HHS RC2 AG036535NIA NIH HHS U01 AG024904NIA NIH HHS U01AG024904NIA NIH HHS U24 AG021886NIBIB NIH HHS 9 P41EB015922-15NIBIB NIH HHS P41 EB015922NICHD NIH HHS HD050735NICHD NIH HHS R01 HD050735NIDA NIH HHS P60 DA011015NIMH NIH HHS MH097268NIMH NIH HHS R01 MH097268NINDS NIH HHS NS080655NINDS NIH HHS R01 NS080655NLM NIH HHS K99 LM011384NLM NIH HHS K99LM011384NLM NIH HHS R00 LM011384NLM NIH HHS R01 LM009012NLM NIH HHS R01 LM010098NLM NIH HHS R01 LM011360
6 · The paper itself

Abstract

The Genetics Core of the Alzheimer's Disease Neuroimaging Initiative (ADNI), formally established in 2009, aims to provide resources and facilitate research related to genetic predictors of multidimensional Alzheimer's disease (AD)-related phenotypes. Here, we provide a systematic review of genetic studies published between 2009 and 2012 where either ADNI APOE genotype or genome-wide association study (GWAS) data were used. We review and synthesize ADNI genetic associations with disease status or quantitative disease endophenotypes including structural and functional neuroimaging, fluid biomarker assays, and cognitive performance. We also discuss the diverse analytical strategies used in these studies, including univariate and multivariate analysis, meta-analysis, pathway analysis, and interaction and network analysis. Finally, we perform pathway and network enrichment analyses of these ADNI genetic associations to highlight key mechanisms that may drive disease onset and trajectory. Major ADNI findings included all the top 10 AD genes and several of these (e.g., APOE, BIN1, CLU, CR1, and PICALM) were corroborated by ADNI imaging, fluid and cognitive phenotypes. ADNI imaging genetics studies discovered novel findings (e.g., FRMD6) that were later replicated on different data sets. Several other genes (e.g., APOC1, FTO, GRIN2B, MAGI2, and TOMM40) were associated with multiple ADNI phenotypes, warranting further investigation on other data sets. The broad availability and wide scope of ADNI genetic and phenotypic data has advanced our understanding of the genetic basis of AD and has nominated novel targets for future studies employing next-generation sequencing and convergent multi-omics approaches, and for clinical drug and biomarker development.

Indexed as

Alzheimer DiseaseBiomarkersCognitionCognitive DysfunctionHumansNeuroimagingPhenotypeBiomarkers

Identifiers

PMID24092460
PMCPMC3976843
OpenAlexW2122066039

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.