Evidence map›Paper›PMID 24204263›Full record

ArticlePLoS pathogens2013

ZASC1 stimulates HIV-1 transcription elongation by recruiting P-TEFb and TAT to the LTR promoter.

James W Bruce, Rachel Reddington, Elizabeth Mathieu, Megan Bracken, John A T Young, Paul Ahlquist

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.1field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

James W BruceMorgridge Institute for Research, Madison, Wisconsin, United States of America ; Institute for Molecular Virology, University of Wisconsin, Madison, Wisconsin, United States of America ; McArdle Laboratory for Cancer Research, University of Wisconsin, Madison, Wisconsin, United States of America.
Rachel Reddington
Elizabeth Mathieu
Megan Bracken
John A T Young
Paul Ahlquist
Morgridge Institute for Research · USUniversity of Wisconsin–Madison · USHoward Hughes Medical Institute · USSalk Institute for Biological Studies · US

Funding

Visualizing EBV and HCMV DNA Dynamics During InfectionP01CA022443 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Paul F. Lambert · 1985 to 2026
$53.1M
Cellular factors in gammaretrovirus replicationR01AI072645 · NIAID · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI YOUNG, JOHN A T · 2007 to 2011
$2.2M
Howard Hughes Medical InstituteNCI NIH HHS CA22443NCI NIH HHS P01 CA022443NIAID NIH HHS AI72645NIAID NIH HHS R01 AI072645
6 · The paper itself

Abstract

Transcription from the HIV-1 LTR promoter efficiently initiates but rapidly terminates because of a non-processive form of RNA polymerase II. This premature termination is overcome by assembly of an HIV-1 TAT/P-TEFb complex at the transactivation response region (TAR), a structured RNA element encoded by the first 59 nt of HIV-1 mRNA. Here we have identified a conserved DNA-binding element for the cellular transcription factor, ZASC1, in the HIV-1 core promoter immediately upstream of TAR. We show that ZASC1 interacts with TAT and P-TEFb, co-operating with TAT to regulate HIV-1 gene expression, and promoting HIV-1 transcriptional elongation. The importance of ZASC1 to HIV-1 transcription elongation was confirmed through mutagenesis of the ZASC1 binding sites in the LTR promoter, shRNAs targeting ZASC1 and expression of dominant negative ZASC1. Chromatin immunoprecipitation analysis revealed that ZASC1 recruits Tat and P-TEFb to the HIV-1 core promoter in a TAR-independent manner. Thus, we have identified ZASC1 as novel regulator of HIV-1 gene expression that functions through the DNA-dependent, RNA-independent recruitment of TAT/P-TEFb to the HIV-1 promoter.

Indexed as

HIV Long Terminal RepeatPromoter Regions, GeneticTranscription Elongation, GeneticDNA-Binding ProteinsHeLa CellsHIV-1HIV InfectionsHumansJurkat CellsNuclear ProteinsPositive Transcriptional Elongation Factor Btat Gene Products, Human Immunodeficiency VirusDNA-Binding ProteinsNuclear ProteinsPositive Transcriptional Elongation Factor Btat Gene Products, Human Immunodeficiency VirusZNF639 protein, human

Identifiers

PMID24204263
PMCPMC3812036
OpenAlexW2065994522

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.