Evidence map›Paper›PMID 24785657›Full record

ArticleThe Biochemical journal2014

NRBF2 regulates macroautophagy as a component of Vps34 Complex I.

Yanyan Cao, Yichen Wang, Widian F Abi Saab, Fajun Yang, Jeffrey E Pessin, Jonathan M Backer

Abstract read
In one paragraph

Article in The Biochemical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 2 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 2 syntheses or guidelines pooled it, 87 citations in OpenAlex.

  1. Guideline
  2. Guideline
  3. Article
  4. The human autophagy-initiating complexes ULK1C and PI3KC3-C1.The Journal of biological chemistry · 2025
    Review
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  8. Article
  9. Article
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  12. Article
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  14. Article
  15. Review
  16. Article
  17. Article
  18. Class III PI3K Biology.Current topics in microbiology and immunology · 2022
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yanyan Cao*Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, U.S.A.
Yichen Wang*Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, U.S.A.
Widian F Abi Saab*Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, U.S.A.
Fajun Yang†Department of Medicine, Albert Einstein College of Medicine, Bronx, NY, U.S.A.
Jeffrey E Pessin
Jonathan M Backer*Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY, U.S.A.
Albert Einstein College of Medicine · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI Ulrich Steidl · 1985 to 2026
$111.2M
Stable Isotope and Metabolomics CoreP60DK020541 · NIDDK · YESHIVA UNIVERSITY · PI PESSIN, JEFFREY E. · 1986 to 2014
$29.8M
Special Animal CoreP30DK041296 · NIDDK · YESHIVA UNIVERSITY · PI GUPTA, SANJEEV · 1989 to 2018
$22.9M
Molecular basis for skeletal muscle pathophysiology in Pompe's diseaseR01AR064420 · NIAMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI PESSIN, JEFFREY E. · 2013 to 2017
$2.2M
Physiology of Class III PI 3-kinase Signaling 2R01AG039632 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI BACKER, JONATHAN M. · 2011 to 2015
$1.7M
NCI NIH HHS P30 CA013330NIAMS NIH HHS AR064420NIAMS NIH HHS R01 AR064420NIA NIH HHS AG039632NIA NIH HHS R01 AG039632NIDDK NIH HHS P30 DK041296NIDDK NIH HHS P60 DK020541
6 · The paper itself

Abstract

Macroautophagy is a physiological cellular response to nutrient stress, which leads to the engulfment of cytosolic contents by a double-walled membrane structure, the phagophore. Phagophores seal to become autophagosomes, which then fuse with lysosomes to deliver their contents for degradation. Macroautophagy is regulated by numerous cellular factors, including the Class III PI3K (phosphoinositide 3-kinase) Vps34 (vacuolar protein sorting 34). The autophagic functions of Vps34 require its recruitment to a complex that includes Vps15, Beclin-1 and Atg14L (autophagy-related 14-like protein) and is known as Vps34 Complex I. We have now identified NRBF2 (nuclear receptor-binding factor 2) as a new member of Vps34 Complex I. NRBF2 binds to complexes that include Vps34, Vps15, Beclin-1 and ATG-14L, but not the Vps34 Complex II component UVRAG (UV radiation resistance-associated gene). NRBF2 directly interacts with Vps15 via the Vps15 WD40 domain as well as other regions of Vps15. The formation of GFP-LC3 (light chain 3) punctae and PE (phosphatidylethanolamine)-conjugated LC3 (LC3-II) in serum-starved cells was inhibited by NRBF2 knockdown in the absence and presence of lysosomal inhibitors, and p62 levels were increased. Thus NRBF2 plays a critical role in the induction of starvation-induced autophagy as a specific member of Vps34 Complex I.

Indexed as

Adaptor Proteins, Vesicular TransportApoptosis Regulatory ProteinsAutophagyAutophagy-Related ProteinsBeclin-1Class III Phosphatidylinositol 3-KinasesGene Expression RegulationGenes, ReporterGreen Fluorescent ProteinsHEK293 CellsHSP70 Heat-Shock ProteinsHumansLysosomesMembrane ProteinsMicrotubule-Associated ProteinsMitochondrial ProteinsAdaptor Proteins, Vesicular TransportApoptosis Regulatory ProteinsATG14 protein, humanAutophagy-Related ProteinsBeclin-1BECN1 protein, humanClass III Phosphatidylinositol 3-KinasesGreen Fluorescent ProteinsHSP70 Heat-Shock ProteinsHSPA9 protein, humanMAP1LC3A protein, humanMembrane ProteinsMicrotubule-Associated ProteinsMitochondrial ProteinsNRBF2 protein, humanPIK3R4 protein, humanRNA, Small InterferingTrans-ActivatorsTumor Suppressor ProteinsUVRAG protein, humanVacuolar Sorting Protein VPS15

Identifiers

PMID24785657
PMCPMC4180102
OpenAlexW2312621780

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.