Evidence map›Paper›PMID 24798335›Full record

ArticleThe Journal of biological chemistry2014

A phosphotyrosine switch for cargo sequestration at clathrin-coated buds.

Souvik Chakraborty, Perunthottathu K Umasankar, G Michael Preston, Puneet Khandelwal, Gerard Apodaca, Simon C Watkins, Linton M Traub

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. β-arrestin-dependent PI(4,5)PProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Souvik ChakrabortyFrom the Department of Cell Biology and.
Perunthottathu K UmasankarFrom the Department of Cell Biology and.
G Michael PrestonFrom the Department of Cell Biology and.
Puneet Khandelwalthe Renal-Electrolyte Division, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261.
Gerard Apodacathe Renal-Electrolyte Division, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261.
Simon C WatkinsFrom the Department of Cell Biology and.
Linton M TraubFrom the Department of Cell Biology and traub@pitt.edu.
University of Pittsburgh · US

Funding

Fluorescent Biosensors for Networks and PathwaysU54GM103529 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI WAGGONER, ALAN S. · 2012 to 2013
$6.3M
Clathrin-coated Vesicles and Endocytic FunctionR01GM106963 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TRAUB, LINTON M. · 2013 to 2018
$1.5M
NIGMS NIH HHS R01 GM106963NIGMS NIH HHS R01 GM106963-17NIGMS NIH HHS U54 GM103529
6 · The paper itself

Abstract

The AP-2 clathrin adaptor complex oversees endocytic cargo selection in two parallel but independent manners. First, by physically engaging peptide-based endocytic sorting signals, a subset of clathrin-dependent transmembrane cargo is directly collected into assembling buds. Synchronously, by interacting with an assortment of clathrin-associated sorting proteins (CLASPs) that independently select different integral membrane cargo for inclusion within the incipient bud, AP-2 handles additional cargo capture indirectly. The distal platform subdomain of the AP-2 β2 subunit appendage is a privileged CLASP-binding surface that recognizes a cognate, short α-helical interaction motif. This signal, found in the CLASPs β-arrestin and the autosomal recessive hypercholesterolemia (ARH) protein, docks into an elongated groove on the β2 appendage platform. Tyr-888 is a critical constituent of this spatially confined β2 appendage contact interface and is phosphorylated in numerous high-throughput proteomic studies. We find that a phosphomimetic Y888E substitution does not interfere with incorporation of expressed β2-YFP subunit into AP-2 or alter AP-2 deposition at surface clathrin-coated structures. The Y888E mutation does not affect interactions involving the sandwich subdomain of the β2 appendage, indicating that the mutated appendage is folded and operational. However, the Y888E, but not Y888F, switch selectively uncouples interactions with ARH and β-arrestin. Phyogenetic conservation of Tyr-888 suggests that this residue can reversibly control occupancy of the β2 platform-binding site and, hence, cargo sorting.

Indexed as

Adaptor Protein Complex 2Amino Acid MotifsAmino Acid SubstitutionAnimalsArrestinsCell Line, TransformedClathrin-Coated VesiclesFibroblastsMiceMice, KnockoutMutation, MissensePhosphorylationPhosphotyrosineAdaptor Protein Complex 2ArrestinsPhosphotyrosineClathrinEndocytosisG Protein-coupled Receptor (GPCR)Intracellular TraffickingLipoproteinPhosphoproteomicsPhosphotyrosine Signaling

Identifiers

PMID24798335
PMCPMC4067187
OpenAlexW2025780982

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.