Evidence map›Paper›PMID 25046113›Full record

ArticleAutophagy2014

GA binding protein augments autophagy via transcriptional activation of BECN1-PIK3C3 complex genes.

Wan Zhu, Gayathri Swaminathan, Edward D Plowey

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. The ATG14: multi-layer autophagy control and an emerging therapeutic target in cancer.Apoptosis : an international journal on programmed cell death · 2026
    Review
  3. The Biological Role and Clinical Significance of BECLIN-1 in Cancer.International journal of molecular sciences · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Wan ZhuDepartment of Pathology; Stanford University School of Medicine; Stanford, CA USA.
Gayathri SwaminathanDepartment of Pathology; Stanford University School of Medicine; Stanford, CA USA.
Edward D PloweyDepartment of Pathology; Stanford University School of Medicine; Stanford, CA USA.
Stanford Medicine · US

Funding

NMDA receptor trafficking by the autophagy regulatory protein beclin 1K08NS085324 · NINDS · STANFORD UNIVERSITY · PI PLOWEY, EDWARD D · 2014 to 2017
$717k
NCRR NIH HHS 1S10RR02678001NINDS NIH HHS K08 NS085324NINDS NIH HHS NS085324
6 · The paper itself

Abstract

Macroautophagy is a vesicular catabolic trafficking pathway that is thought to protect cells from diverse stressors and to promote longevity. Recent studies have revealed that transcription factors play important roles in the regulation of autophagy. In this study, we have identified GA binding protein (GABP) as a transcriptional regulator of the combinatorial expression of BECN1-PIK3C3 complex genes involved in autophagosome initiation. We performed bioinformatics analyses that demonstrated highly conserved putative GABP sites in genes that encode BECN1/Beclin 1, several BECN1 interacting proteins, and downstream autophagy proteins including the ATG12-ATG5-ATG16L1 complex. We demonstrate that GABP binds to the promoter regions of BECN1-PIK3C3 complex genes and activates their transcriptional activities. Knockdown of GABP reduced BECN1-PIK3C3 complex transcripts, BECN1-PIK3C3 complex protein levels and autophagy in cultured cells. Conversely, overexpression of GABP increased autophagy. Nutrient starvation increased GABP-dependent transcriptional activity of BECN1-PIK3C3 complex gene promoters and increased the recruitment of GABP to the BECN1 promoter. Our data reveal a novel function of GABP in the regulation of autophagy via transcriptional activation of the BECN1-PIK3C3 complex.

Indexed as

AnimalsApoptosis Regulatory ProteinsAutophagyBeclin-1Cell LineGA-Binding Protein Transcription FactorGene Expression RegulationHumansMembrane ProteinsPhagosomesPhosphatidylinositol 3-KinasesRatsTranscriptional ActivationApoptosis Regulatory ProteinsBeclin-1BECN1 protein, humanBecn1 protein, ratGA-Binding Protein Transcription FactorMembrane ProteinsPhosphatidylinositol 3-KinasesautophagyBECN1GA binding proteinPIK3C3transcription

Identifiers

PMID25046113
PMCPMC4206539
OpenAlexW2002751467

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.