Evidence map›Paper›PMID 25118255›Full record

ArticlePlant physiology2014

Large-scale identification of gibberellin-related transcription factors defines group VII ETHYLENE RESPONSE FACTORS as functional DELLA partners.

Nora Marín-de la Rosa, Berta Sotillo, Pal Miskolczi, Daniel J Gibbs, Jorge Vicente, Pilar Carbonero, Luis Oñate-Sánchez, Michael J Holdsworth, Rishikesh Bhalerao, David Alabadí and 1 more

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
19.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 154 citations in OpenAlex.

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25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Nora Marín-de la RosaInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).
Berta SotilloInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).
Pal MiskolcziInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).ORCID http://orcid.org/0000-0002-1036-5831
Daniel J GibbsInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).
Jorge VicenteInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).
Pilar CarboneroInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).
Luis Oñate-SánchezInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).
Michael J HoldsworthInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).ORCID http://orcid.org/0000-0002-3954-9215
Rishikesh BhaleraoInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).
David AlabadíInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.) dalabadi@ibmcp.upv.es.ORCID http://orcid.org/0000-0001-8492-6713
Miguel A BlázquezInstituto de Biología Molecular y Celular de Plantas, 46022 Valencia, Spain (N.M.-d.l.R., B.S., D.A., M.A.B.);Department of Forest Genetics and Plant Physiology, Umeå Plant Science Center, Swedish University of Agricultural Sciences, 90187 Umea, Sweden (P.M., R.B.);Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, United Kingdom (D.J.G., J.V., M.J.H.);Centro de Biotecnología y Genómica de Plantas, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Spain (P.C., L.O.-S.); andCollege of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia (R.B.).
Umeå Plant Science Centre · SEUniversity of Nottingham · GBKing Saud University · SASwedish University of Agricultural Sciences · SE

Funding

Biotechnology and Biological Sciences Research Council BB/G010595/1Biotechnology and Biological Sciences Research Council BB/K000144/1Biotechnology and Biological Sciences Research Council BB/M002268/1
6 · The paper itself

Abstract

DELLA proteins are the master negative regulators in gibberellin (GA) signaling acting in the nucleus as transcriptional regulators. The current view of DELLA action indicates that their activity relies on the physical interaction with transcription factors (TFs). Therefore, the identification of TFs through which DELLAs regulate GA responses is key to understanding these responses from a mechanistic point of view. Here, we have determined the TF interactome of the Arabidopsis (Arabidopsis thaliana) DELLA protein GIBBERELLIN INSENSITIVE and screened a collection of conditional TF overexpressors in search of those that alter GA sensitivity. As a result, we have found RELATED TO APETALA2.3, an ethylene-induced TF belonging to the group VII ETHYLENE RESPONSE FACTOR of the APETALA2/ethylene responsive element binding protein superfamily, as a DELLA interactor with physiological relevance in the context of apical hook development. The combination of transactivation assays and chromatin immunoprecipitation indicates that the interaction with GIBBERELLIN INSENSITIVE impairs the activity of RELATED TO APETALA2.3 on the target promoters. This mechanism represents a unique node in the cross regulation between the GA and ethylene signaling pathways controlling differential growth during apical hook development.

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceDNA PrimersGibberellinsPolymerase Chain ReactionPromoter Regions, GeneticProtein BindingTranscriptional ActivationTranscription FactorsArabidopsis ProteinsDNA PrimersGAI protein, ArabidopsisGibberellinsTranscription Factors

Identifiers

PMID25118255
PMCPMC4213073
OpenAlexW1995693867

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.