Evidence map›Paper›PMID 25301889›Full record

ArticlePlant physiology2014

Disruption of the CYTOCHROME C OXIDASE DEFICIENT1 gene leads to cytochrome c oxidase depletion and reorchestrated respiratory metabolism in Arabidopsis.

Jennifer Dahan, Guillaume Tcherkez, David Macherel, Abdelilah Benamar, Katia Belcram, Martine Quadrado, Nadège Arnal, Hakim Mireau

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
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  6. Map-based cloning of Zmccr3 and its network construction and validation for regulating maize seed germination.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  19. International journal of molecular sciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jennifer DahanAgroParisTech and Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (J.D., K.B., M.Q., N.A., H.M.);Institut de Biologie des Plantes, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8618, and Plateforme Métabolisme-Métabolome, Institut Fédératif de Recherche 87, Université Paris-Sud, 91405 Orsay cedex, France (G.T.);Institut Universitaire de France, 75005 Paris, France (G.T.); andUniversité d'Angers, Unité Mixte de Recherche 1345, Institut de Recherche en Horticulture et Semences, Angers 49045, France (D.M., A.B.).
Guillaume TcherkezAgroParisTech and Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (J.D., K.B., M.Q., N.A., H.M.);Institut de Biologie des Plantes, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8618, and Plateforme Métabolisme-Métabolome, Institut Fédératif de Recherche 87, Université Paris-Sud, 91405 Orsay cedex, France (G.T.);Institut Universitaire de France, 75005 Paris, France (G.T.); andUniversité d'Angers, Unité Mixte de Recherche 1345, Institut de Recherche en Horticulture et Semences, Angers 49045, France (D.M., A.B.).
David MacherelAgroParisTech and Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (J.D., K.B., M.Q., N.A., H.M.);Institut de Biologie des Plantes, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8618, and Plateforme Métabolisme-Métabolome, Institut Fédératif de Recherche 87, Université Paris-Sud, 91405 Orsay cedex, France (G.T.);Institut Universitaire de France, 75005 Paris, France (G.T.); andUniversité d'Angers, Unité Mixte de Recherche 1345, Institut de Recherche en Horticulture et Semences, Angers 49045, France (D.M., A.B.).
Abdelilah BenamarAgroParisTech and Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (J.D., K.B., M.Q., N.A., H.M.);Institut de Biologie des Plantes, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8618, and Plateforme Métabolisme-Métabolome, Institut Fédératif de Recherche 87, Université Paris-Sud, 91405 Orsay cedex, France (G.T.);Institut Universitaire de France, 75005 Paris, France (G.T.); andUniversité d'Angers, Unité Mixte de Recherche 1345, Institut de Recherche en Horticulture et Semences, Angers 49045, France (D.M., A.B.).
Katia BelcramAgroParisTech and Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (J.D., K.B., M.Q., N.A., H.M.);Institut de Biologie des Plantes, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8618, and Plateforme Métabolisme-Métabolome, Institut Fédératif de Recherche 87, Université Paris-Sud, 91405 Orsay cedex, France (G.T.);Institut Universitaire de France, 75005 Paris, France (G.T.); andUniversité d'Angers, Unité Mixte de Recherche 1345, Institut de Recherche en Horticulture et Semences, Angers 49045, France (D.M., A.B.).
Martine QuadradoAgroParisTech and Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (J.D., K.B., M.Q., N.A., H.M.);Institut de Biologie des Plantes, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8618, and Plateforme Métabolisme-Métabolome, Institut Fédératif de Recherche 87, Université Paris-Sud, 91405 Orsay cedex, France (G.T.);Institut Universitaire de France, 75005 Paris, France (G.T.); andUniversité d'Angers, Unité Mixte de Recherche 1345, Institut de Recherche en Horticulture et Semences, Angers 49045, France (D.M., A.B.).
Nadège ArnalAgroParisTech and Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (J.D., K.B., M.Q., N.A., H.M.);Institut de Biologie des Plantes, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8618, and Plateforme Métabolisme-Métabolome, Institut Fédératif de Recherche 87, Université Paris-Sud, 91405 Orsay cedex, France (G.T.);Institut Universitaire de France, 75005 Paris, France (G.T.); andUniversité d'Angers, Unité Mixte de Recherche 1345, Institut de Recherche en Horticulture et Semences, Angers 49045, France (D.M., A.B.).
Hakim MireauAgroParisTech and Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (J.D., K.B., M.Q., N.A., H.M.);Institut de Biologie des Plantes, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8618, and Plateforme Métabolisme-Métabolome, Institut Fédératif de Recherche 87, Université Paris-Sud, 91405 Orsay cedex, France (G.T.);Institut Universitaire de France, 75005 Paris, France (G.T.); andUniversité d'Angers, Unité Mixte de Recherche 1345, Institut de Recherche en Horticulture et Semences, Angers 49045, France (D.M., A.B.) hakim.mireau@versailles.inra.fr.
AgroParisTech · FRInstitut Jean-Pierre Bourgin · FRUniversité d'Angers · FRUniversité Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cytochrome c oxidase is the last respiratory complex of the electron transfer chain in mitochondria and is responsible for transferring electrons to oxygen, the final acceptor, in the classical respiratory pathway. The essentiality of this step makes it that depletion in complex IV leads to lethality, thereby impeding studies on complex IV assembly and respiration plasticity in plants. Here, we characterized Arabidopsis (Arabidopsis thaliana) embryo-lethal mutant lines impaired in the expression of the CYTOCHROME C OXIDASE DEFICIENT1 (COD1) gene, which encodes a mitochondria-localized PentatricoPeptide Repeat protein. Although unable to germinate under usual conditions, cod1 homozygous embryos could be rescued from immature seeds and developed in vitro into slow-growing bush-like plantlets devoid of a root system. cod1 mutants were defective in C-to-U editing events in cytochrome oxidase subunit2 and NADH dehydrogenase subunit4 transcripts, encoding subunits of respiratory complex IV and I, respectively, and consequently lacked cytochrome c oxidase activity. We further show that respiratory oxygen consumption by cod1 plantlets is exclusively associated with alternative oxidase activity and that alternative NADH dehydrogenases are also up-regulated in these plants. The metabolomics pattern of cod1 mutants was also deeply altered, suggesting that alternative metabolic pathways compensated for the probable resulting restriction in NADH oxidation. Being the first complex IV-deficient mutants described in higher plants, cod1 lines should be instrumental to future studies on respiration homeostasis.

Indexed as

Gene Expression Regulation, PlantAlternative OxidaseArabidopsisArabidopsis ProteinsCell RespirationElectron TransportElectron Transport Complex IElectron Transport Complex IVGene Expression Regulation, EnzymologicMetabolomicsMitochondriaMitochondrial ProteinsNADH DehydrogenaseOxidation-ReductionOxidoreductasesOxygen ConsumptionAlternative OxidaseArabidopsis ProteinsElectron Transport Complex IElectron Transport Complex IVMitochondrial ProteinsNADH DehydrogenaseOxidoreductasesPlant Proteins

Identifiers

PMID25301889
PMCPMC4256860
OpenAlexW2008984851

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.