Evidence map›Paper›PMID 25445646›Full record

ArticleInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases2014

Co-circulation of soricid- and talpid-borne hantaviruses in Poland.

Se Hun Gu, Janusz Hejduk, Janusz Markowski, Hae Ji Kang, Marcin Markowski, Małgorzata Połatyńska, Beata Sikorska, Paweł P Liberski, Richard Yanagihara

Open access · greenAbstract read
In one paragraph

Article in Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. ZoonoticViruses · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Occurrence ofMicroorganisms · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Genetic Diversity of Artybash Virus in the Laxmann's Shrew (Sorex caecutiens).Vector borne and zoonotic diseases (Larchmont, N.Y.) · 2016
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Se Hun GuDepartment of Pediatrics, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI, USA; Department of Tropical Medicine, Medical Microbiology and Pharmacology, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI, USA.
Janusz HejdukDepartment of Teacher Training and Biodiversity Studies, Faculty of Biology and Environmental Protection, University of Łódź, S. Banacha Street 1/3, 90-237 Łódź, Poland.
Janusz MarkowskiDepartment of Teacher Training and Biodiversity Studies, Faculty of Biology and Environmental Protection, University of Łódź, S. Banacha Street 1/3, 90-237 Łódź, Poland.
Hae Ji KangDepartment of Pediatrics, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI, USA; Department of Tropical Medicine, Medical Microbiology and Pharmacology, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI, USA.
Marcin MarkowskiDepartment of Experimental Zoology and Evolutionary Biology, Faculty of Biology and Environmental Protection, University of Łódź, Banacha 12/16, 90-237 Łódź, Poland.
Małgorzata PołatyńskaDepartment of Algology and Mycology, University of Łódź, Banacha 12/16, 90-237 Łódź, Poland.
Beata SikorskaDepartment of Molecular Pathology and Neuropathology, Medical University of Łódź, Czechoslowacka Street 8/10, 92-216 Łódź, Poland.
Paweł P LiberskiDepartment of Molecular Pathology and Neuropathology, Medical University of Łódź, Czechoslowacka Street 8/10, 92-216 Łódź, Poland.
Richard YanagiharaDepartment of Pediatrics, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI, USA; Department of Tropical Medicine, Medical Microbiology and Pharmacology, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI, USA. Electronic address: ryanagih@hawaii.edu.
University of Łódź · PLUniversity of Hawaiʻi at Mānoa · USMedical University of Lodz · PL

Funding

Small Grants ProgramP30GM114737 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI NERURKAR, VIVEK RAMCHANDRA · 2015 to 2022
$8.1M
Pacific Center for Emerging Infectious Diseases ResearchP20GM103516 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI YANAGIHARA, RICHARD · 2012 to 2014
$6.1M
Pilot Project ProgramP30GM103341 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI SHOHET, RALPH V. · 2012 to 2016
$5.5M
Intraspecies Transmission and Infectivity of Insectivore-Borne HantavirusesR01AI075057 · NIAID · UNIVERSITY OF HAWAII AT MANOA · PI YANAGIHARA, RICHARD · 2008 to 2011
$1.5M
NIAID NIH HHS R01 AI075057NIAID NIH HHS R01AI075057NIGMS NIH HHS P20 GM103516NIGMS NIH HHS P20GM103516NIGMS NIH HHS P30 GM103341NIGMS NIH HHS P30GM103341NIGMS NIH HHS P30 GM114737
6 · The paper itself

Abstract

Previously, we reported the discovery of a genetically distinct hantavirus, designated Boginia virus (BOGV), in the Eurasian water shrew (Neomys fodiens), as well as the detection of Seewis virus (SWSV) in the Eurasian common shrew (Sorex araneus), in central Poland. In this expanded study of 133 shrews and 69 moles captured during 2010-2013 in central and southeastern Poland, we demonstrate the co-circulation of BOGV in the Eurasian water shrew and SWSV in the Eurasian common shrew, Eurasian pygmy shrew (Sorex minutus) and Mediterranean water shrew (Neomys anomalus). In addition, we found high prevalence of Nova virus (NVAV) infection in the European mole (Talpa europaea), with evidence of NVAV RNA in heart, lung, liver, kidney, spleen and intestine. The nucleotide and amino acid sequence variation of the L segment among the SWSV strains was 0-18.8% and 0-5.4%, respectively. And for the 38 NVAV strains from European moles captured in Huta Dłutowska, the L-segment genetic similarity ranged from 94.1%-100% at the nucleotide level and 96.3%-100% at the amino acid level. Phylogenetic analyses showed geographic-specific lineages of SWSV and NVAV in Poland, not unlike that of rodent-borne hantaviruses, suggesting long-standing host-specific adaptation. The co-circulation and distribution of BOGV, SWSV and NVAV in Poland parallels findings of multiple hantavirus species co-existing in their respective rodent reservoir species elsewhere in Europe. Also, the detection of SWSV in three syntopic shrew species resembles spill over events observed among some rodent-borne hantaviruses.

Indexed as

AnimalsHantavirus InfectionsMolesOrthohantavirusPhylogenyPolandShrewsTissue DistributionHantavirusNeomysPhylogenyPolandSorexTalpa

Identifiers

PMID25445646
PMCPMC4257849
OpenAlexW2092120333

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.