Evidence map›Paper›PMID 25758368›Full record

ArticleProteomics2015

A proteomic approach to discover and compare interacting partners of papillomavirus E2 proteins from diverse phylogenetic groups.

Moon Kyoo Jang, D Eric Anderson, Koenraad van Doorslaer, Alison A McBride

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proteomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Moon Kyoo JangLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, Bethesda, MD, USA.
D Eric AndersonAdvanced Mass Spectrometry Core, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD, USA.
Koenraad van DoorslaerLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, Bethesda, MD, USA.
Alison A McBrideLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, Bethesda, MD, USA.
National Institute of Allergy and Infectious Diseases · USNational Institutes of Health · US

Funding

Advanced Mass Spectrometry FacilityZICDK062009 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI ANDERSON, DAVID · 2009 to 2025
$26.4M
Replication mechanisms of human papillomaviruses (HPV)ZIAAI000713 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI MCBRIDE, ALISON · 2009 to 2025
$12.4M
Characterization: Papillomavirus Regulatory ProteinsZ01AI000713 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI MCBRIDE, ALISON · 1994 to 2008
$1.4M
Intramural NIH HHS Z01 AI000713Intramural NIH HHS ZIA AI000713
6 · The paper itself

Abstract

Papillomaviruses are a very successful group of viruses that replicate persistently in localized regions of the stratified epithelium of their specific host. Infection results in pathologies ranging from asymptomatic infection, benign warts, to malignant carcinomas. Despite this diversity, papillomavirus genomes are small (7-8 kbp) and contain at most eight genes. To sustain the complex papillomaviral life cycle, each viral protein has multiple functions and interacts with and manipulates a plethora of cellular proteins. In this study, we use tandem affinity purification and MS to identify host factors that interact with 11 different papillomavirus E2 proteins from diverse phylogenetic groups. The E2 proteins function in viral transcription and replication and correspondingly interact with host proteins involved in transcription, chromatin remodeling and modification, replication, and RNA processing.

Indexed as

Protein Interaction MapsBlotting, WesternCells, CulturedChromatography, LiquidDNA-Binding ProteinsFibroblastsHumansImmunoprecipitationOncogene Proteins, ViralPapillomaviridaeProteomeProteomicsTandem Mass SpectrometryViral ProteinsDNA-Binding Proteinsoncogene protein E2, Human papillomavirus type 1Oncogene Proteins, ViralProteomeViral ProteinsBRD4E2HPVMicrobiologyPapillomavirusVirus

Identifiers

PMID25758368
PMCPMC4535189
OpenAlexW2062594287

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.