Evidence map›Paper›PMID 25853335›Full record

SynthesisKidney international2015

Deceased donor multidrug resistance protein 1 and caveolin 1 gene variants may influence allograft survival in kidney transplantation.

Jun Ma, Jasmin Divers, Nicholette D Palmer, Bruce A Julian, Ajay K Israni, David Schladt, Stephen O Pastan, Kryt Chattrabhuti, Michael D Gautreaux, Vera Hauptfeld and 16 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Kidney international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Novel Aspects of Immunogenetics and Post-Transplant Events in Kidney Transplantation.Transplant international : official journal of the European Society for Organ Transplantation · 2024
    Review
  5. Article
  6. Review
  7. Observational
  8. Review
  9. Transplant genetics and genomics.Nature reviews. Genetics · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 7 institutions in 2 countries.

Jun MaDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Jasmin DiversDivision of Public Health Sciences, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Nicholette D PalmerCenter for Genomics & Personalized Medicine Research, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Bruce A JulianDepartment of Medicine, Division of Nephrology, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.
Ajay K IsraniDepartment of Medicine, Division of Nephrology, Hennepin County Medical Center, University of Minnesota, Minneapolis, Minnesota, USA.
David SchladtMinneapolis Medical Research Foundation, Minneapolis, Minnesota, USA.
Stephen O PastanDepartment of Medicine, Renal Division, Emory University School of Medicine, Atlanta, Georgia, USA.
Kryt ChattrabhutiDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Michael D GautreauxGeneral Surgery & HLA Immunogenetics Lab, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Vera HauptfeldAlabama Regional Histocompatibility Laboratory at UAB, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.
Robert A BrayDepartment of Pathology & Lab Medicine; Emory School of Medicine, Atlanta, Georgia, USA.
Allan D KirkDepartment of Surgery, Duke University School of Medicine, Durham, North Carolina, USA.
W Mark BrownDivision of Public Health Sciences, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Robert S GastonDepartment of Medicine, Division of Nephrology, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.
Jeffrey RogersDepartment of General Surgery, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Alan C FarneyDepartment of General Surgery, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Giuseppe OrlandoDepartment of General Surgery, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Robert J StrattaDepartment of General Surgery, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Meijian GuanCenter for Genomics & Personalized Medicine Research, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Amudha PalanisamyDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Amber M Reeves-DanielDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Donald W BowdenCenter for Genomics & Personalized Medicine Research, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Carl D LangefeldDivision of Public Health Sciences, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Pamela J HicksCenter for Genomics & Personalized Medicine Research, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Lijun MaDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Barry I FreedmanDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.
Wake Forest University · USUniversity of Alabama at Birmingham · USEmory University · USDuke University · USOrthopaedic Research Foundation · USRuijin Hospital · CNUniversity of Minnesota · US

Funding

Pharmacogenomics of Immune Suppressants in Kidney TransplantationU19AI070119 · NIAID · UNIVERSITY OF MINNESOTA · PI MATAS, ARTHUR J · 2006 to 2016
$17.1M
Genetic Analysis of African American Hypertensive End-Stage Renal DiseaseR01DK070941 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 2006 to 2015
$4.7M
Natural History of MYH9-Associated NephropathyR01DK084149 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 2009 to 2012
$2.3M
Genetic Determinants of Renal Transplant Survival from African American DonorsR01MD009055 · NIMHD · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI DIVERS, JASMIN · 2014 to 2018
$2.0M
NIAID NIH HHS 5U19-AI070119NIAID NIH HHS U19 AI070119NIDDK NIH HHS R01 DK070941NIDDK NIH HHS R01 DK084149NIDDK NIH HHS R01 NIH RO1 DK084149NIMHD NIH HHS NIH RO1 MD009055NIMHD NIH HHS R01 MD009055
6 · The paper itself

Abstract

Variants in donor multidrug resistance protein 1 (ABCB1) and caveolin 1 (CAV1) genes are associated with renal allograft failure after transplantation in Europeans. Here we assessed transplantation outcomes of kidneys from 368 African American (AA) and 314 European American (EA) deceased donors based on 38 single-nucleotide polymorphisms (SNPs) spanning ABCB1 and 16 SNPs spanning CAV1, including previously associated index and haplotype-tagging SNPs. Tests for association with time to allograft failure were performed for the 1233 resultant kidney transplantations, adjusting for recipient age, sex, ethnicity, cold ischemia time, panel reactive antibody, human leukocyte antigen match, expanded-criteria donation, and APOL1-nephropathy variants in AA donors. Interaction analyses between APOL1 with ABCB1 and CAV1 were performed. In a meta-analysis of all transplantations, ABCB1 index SNP rs1045642 was associated with time to allograft failure and other ABCB1 SNPs were nominally associated, but not CAV1 SNPs. ABCB1 SNP rs1045642 showed consistent effects with the 558 transplantations from EA donors, but not with the 675 transplantations from AA donors. ABCB1 SNP rs956825 and CAV1 SNP rs6466583 interacted with APOL1 in transplants from AA donors. Thus, the T allele at ABCB1 rs1045642 is associated with shorter renal allograft survival for kidneys from American donors. Interactions between ABCB1 and CAV1 with APOL1 may influence allograft failure for transplanted kidneys from AA donors.

Indexed as

Kidney TransplantationPolymorphism, Single NucleotideTissue DonorsAdultAllograftsApolipoprotein L1ApolipoproteinsATP Binding Cassette Transporter, Subfamily BBlack or African AmericanCaveolin 1Donor SelectionFemaleGenetic Association StudiesGraft SurvivalHaplotypesHumansABCB1 protein, humanAPOL1 protein, humanApolipoprotein L1ApolipoproteinsATP Binding Cassette Transporter, Subfamily BCAV1 protein, humanCaveolin 1Lipoproteins, HDL

Identifiers

PMID25853335
PMCPMC4556550
OpenAlexW2091112148

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.