Evidence map›Paper›PMID 25991909›Full record

ArticleCancer informatics2015

Expression of polarity genes in human cancer.

Wan-Hsin Lin, Yan W Asmann, Panos Z Anastasiadis

Open access · goldAbstract read
In one paragraph

Article in Cancer informatics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

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  16. International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Wan-Hsin LinDepartment of Cancer Biology, Mayo Clinic, Jacksonville, FL, USA.
Yan W AsmannDepartment of Health Sciences Research, Mayo Clinic, Jacksonville, FL, USA.
Panos Z AnastasiadisDepartment of Cancer Biology, Mayo Clinic, Jacksonville, FL, USA.
Mayo Clinic in Florida · US

Funding

Targeted MV-CEA as a Potent Antitumor Agent against GBMP50CA108961 · NCI · MAYO CLINIC ROCHESTER · PI O'NEILL, BRIAN PATRICK · 2004 to 2015
$22.5M
Combining Anti-Invasive and Anti-Angiogenic Therapies for the treatment of GBMR01NS069753 · NINDS · MAYO CLINIC JACKSONVILLE · PI ANASTASIADIS, PANAGIOTIS Z. · 2010 to 2014
$1.6M
Role of the polarity RhoGEF PLEKHG5 on brain tumor dispersalR21NS070117 · NINDS · MAYO CLINIC JACKSONVILLE · PI ANASTASIADIS, PANAGIOTIS Z. · 2010 to 2011
$417k
NCI NIH HHS P50 CA108961NINDS NIH HHS R01 NS069753NINDS NIH HHS R21 NS070117
6 · The paper itself

Abstract

Polarity protein complexes are crucial for epithelial apical-basal polarity and directed cell migration. Since alterations of these processes are common in cancer, polarity proteins have been proposed to function as tumor suppressors or oncogenic promoters. Here, we review the current understanding of polarity protein functions in epithelial homeostasis, as well as tumor formation and progression. As most previous studies focused on the function of single polarity proteins in simplified model systems, we used a genomics approach to systematically examine and identify the expression profiles of polarity genes in human cancer. The expression profiles of polarity genes were distinct in different human tissues and classified cancer types. Additionally, polarity expression profiles correlated with disease progression and aggressiveness, as well as with identified cancer types, where specific polarity genes were commonly altered. In the case of Scribble, gene expression analysis indicated its common amplification and upregulation in human cancer, suggesting a tumor promoting function.

Indexed as

breast cancercancer genomicsglioblastoma multiformepolarity proteins

Identifiers

PMID25991909
PMCPMC4390136
OpenAlexW2061021414

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.