Evidence map›Paper›PMID 26814641›Full record

ArticleMemorias do Instituto Oswaldo Cruz2016

Genetic diversity of Cryptosporidium identified in clinical samples from cities in Brazil and Argentina.

Regina Helena Saramago Peralta, Jorge Néstor Velásquez, Flavia de Souza Cunha, María Laura Pantano, Fernando Campos Sodré, Sidnei da Silva, Osvaldo Germán Astudillo, José Mauro Peralta, Silvana Carnevale

Open access · diamondAbstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 3 pooled it
3.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 3 syntheses or guidelines pooled it, 36 citations in OpenAlex.

  1. Frontiers in microbiology · 2025
    Pooled it
  2. Prevalence of human cryptosporidiosis in the Americas: systematic review and meta-analysis.Revista do Instituto de Medicina Tropical de Sao Paulo · 2022
    Pooled it
  3. Pooled it
  4. Trial
  5. Review
  6. Molecular and Epidemiological Investigation ofPathogens (Basel, Switzerland) · 2025
    Article
  7. Prevalence and Molecular Characterization ofPathogens (Basel, Switzerland) · 2025
    Article
  8. Review
  9. Article
  10. Cryptosporidiosis outbreak in Amazonia, French Guiana, 2018.PLoS neglected tropical diseases · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Regina Helena Saramago PeraltaDepartamento de Patologia, Faculdade de Medicina, Universidade Federal Fluminense, Niterói, RJ, Brasil.
Jorge Néstor VelásquezHospital Municipal de Infecciosas Dr Francisco Javier Muñiz, Buenos Aires, Argentina.
Flavia de Souza CunhaDepartamento de Patologia, Faculdade de Medicina, Universidade Federal Fluminense, Niterói, RJ, Brasil.
María Laura PantanoAdministración Nacional de Laboratorios e Institutos de Salud Dr Carlos G Malbrán, Instituto Nacional de Enfermedades Infecciosas, Buenos Aires, Argentina.
Fernando Campos SodréDepartamento de Patologia, Faculdade de Medicina, Universidade Federal Fluminense, Niterói, RJ, Brasil.
Sidnei da SilvaLaboratório de Parasitologia, Instituto Nacional de Infectologia Evandro Chagas, Fundação Oswaldo Cruz, Rio de Janeiro, RJ, Brasil.
Osvaldo Germán AstudilloAdministración Nacional de Laboratorios e Institutos de Salud Dr Carlos G Malbrán, Instituto Nacional de Enfermedades Infecciosas, Buenos Aires, Argentina.
José Mauro PeraltaInstituto de Microbiologia Prof Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brasil.
Silvana CarnevaleAdministración Nacional de Laboratorios e Institutos de Salud Dr Carlos G Malbrán, Instituto Nacional de Enfermedades Infecciosas, Buenos Aires, Argentina.
Universidade Federal Fluminense · BRAdministración Nacional de Laboratorios e Institutos de Salud · ARConsejo Nacional de Investigaciones Científicas y Técnicas · ARFundação Oswaldo Cruz · BRHospital Muñiz · ARUniversidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The identification and characterisation of Cryptosporidium genotypes and subtypes are fundamental to the study of cryptosporidiosis epidemiology, aiding in prevention and control strategies. The objective was to determine the genetic diversity of Cryptosporidium in samples obtained from hospitals of Rio de Janeiro, Brazil, and Buenos Aires, Argentina. Samples were analysed by microscopy and TaqMan polymerase chain reaction (PCR) assays for Cryptosporidium detection, genotyped by nested-PCR-restriction fragment length polymorphism (RFLP) analysis of the 18S rRNA gene and subtyped by DNA sequencing of the gp60 gene. Among the 89 samples from Rio de Janeiro, Cryptosporidium spp were detected in 26 by microscopy/TaqMan PCR. In samples from Buenos Aires,Cryptosporidium was diagnosed in 15 patients of the 132 studied. The TaqMan PCR and the nested-PCR-RFLP detected Cryptosporidium parvum, Cryptosporidium hominis, and co-infections of both species. In Brazilian samples, the subtypes IbA10G2 and IIcA5G3 were observed. The subtypes found in Argentinean samples were IbA10G2, IaA10G1R4, IaA11G1R4, and IeA11G3T3, and mixed subtypes of Ia and IIa families were detected in the co-infections. C. hominis was the species more frequently detected, and subtype family Ib was reported in both countries. Subtype diversity was higher in Buenos Aires than in Rio de Janeiro and two new subtypes were described for the first time.

Indexed as

AdolescentAdultAgedArgentinaBrazilChildChild, PreschoolCryptosporidiosisCryptosporidiumDNA, ProtozoanDNA, RibosomalFemaleGenetic VariationGenotypeHumansInfantDNA, ProtozoanDNA, Ribosomal

Identifiers

PMID26814641
PMCPMC4727433
OpenAlexW2254706650

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.