Evidence map›Paper›PMID 27088456›Full record

ArticleEpigenetics2016

Arachidonic and oleic acid exert distinct effects on the DNA methylome.

Guillermo A Silva-Martínez, Dalia Rodríguez-Ríos, Yolanda Alvarado-Caudillo, Alejandro Vaquero, Manel Esteller, F Javier Carmona, Sebastian Moran, Finn C Nielsen, Marie Wickström-Lindholm, Katarzyna Wrobel and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 1 pooled it
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 1 synthesis or guideline pooled it, 68 citations in OpenAlex.

  1. Pooled it
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  9. Article
  10. Fatty acids and epigenetics in health and diseases.Food science and biotechnology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 4 countries.

Guillermo A Silva-Martíneza Department of Genetic Engineering , CINVESTAV Irapuato Unit , Irapuato , Mexico.
Dalia Rodríguez-Ríosa Department of Genetic Engineering , CINVESTAV Irapuato Unit , Irapuato , Mexico.
Yolanda Alvarado-Caudillob Department of Medical Sciences , Division of Health Sciences, León Campus, University of Guanajuato , Mexico.
Alejandro Vaqueroc Laboratory of Chromatin Biology, Cancer Epigenetics and Biology Program (PEBC) , IDIBELL, L'Hospitalet de Llobregat , Barcelona , Catalonia , Spain.
Manel Estellerd Laboratory of Cancer Epigenetics, Cancer Epigenetics and Biology Program (PEBC) , IDIBELL, L'Hospitalet de Llobregat , Barcelona , Catalonia , Spain.
F Javier Carmonad Laboratory of Cancer Epigenetics, Cancer Epigenetics and Biology Program (PEBC) , IDIBELL, L'Hospitalet de Llobregat , Barcelona , Catalonia , Spain.
Sebastian Morand Laboratory of Cancer Epigenetics, Cancer Epigenetics and Biology Program (PEBC) , IDIBELL, L'Hospitalet de Llobregat , Barcelona , Catalonia , Spain.
Finn C Nielsene Center for Genomic Medicine, Rigshospitalet , University of Copenhagen , Copenhagen , Denmark.
Marie Wickström-Lindholmf Experimental Cardiovascular Research , Malmö University Hospital, Lund University , Malmö , Sweden.
Katarzyna Wrobelg Department of Chemistry, Division of Natural and Exact Sciences, Guanajuato Campus , University of Guanajuato , Mexico.
Kazimierz Wrobelg Department of Chemistry, Division of Natural and Exact Sciences, Guanajuato Campus , University of Guanajuato , Mexico.
Gloria Barbosa-Sabanerob Department of Medical Sciences , Division of Health Sciences, León Campus, University of Guanajuato , Mexico.
Silvio Zainab Department of Medical Sciences , Division of Health Sciences, León Campus, University of Guanajuato , Mexico.
Gertrud Lunda Department of Genetic Engineering , CINVESTAV Irapuato Unit , Irapuato , Mexico.
Universidad de Guanajuato · MXInstitut Català d'Oncologia · ESInstituto Tecnológico Superior de Irapuato · MXInstitut d'Investigació Biomédica de Bellvitge · ESLund University · SEUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Abnormal fatty acid metabolism and availability are landmarks of metabolic diseases, which in turn are associated with aberrant DNA methylation profiles. To understand the role of fatty acids in disease epigenetics, we sought DNA methylation profiles specifically induced by arachidonic (AA) or oleic acid (OA) in cultured cells and compared those with published profiles of normal and diseased tissues. THP-1 monocytes were stimulated with AA or OA and analyzed using Infinium HumanMethylation450 BeadChip (Illumina) and Human Exon 1.0 ST array (Affymetrix). Data were corroborated in mouse embryonic fibroblasts. Comparisons with publicly available data were conducted by standard bioinformatics. AA and OA elicited a complex response marked by a general DNA hypermethylation and hypomethylation in the 1-200 μM range, respectively, with a maximal differential response at the 100 μM dose. The divergent response to AA and OA was prominent within the gene body of target genes, where it correlated positively with transcription. AA-induced DNA methylation profiles were similar to the corresponding profiles described for palmitic acid, atherosclerosis, diabetes, obesity, and autism, but relatively dissimilar from OA-induced profiles. Furthermore, human atherosclerosis grade-associated DNA methylation profiles were significantly enriched in AA-induced profiles. Biochemical evidence pointed to β-oxidation, PPAR-α, and sirtuin 1 as important mediators of AA-induced DNA methylation changes. In conclusion, AA and OA exert distinct effects on the DNA methylome. The observation that AA may contribute to shape the epigenome of important metabolic diseases, supports and expands current diet-based therapeutic and preventive efforts.

Indexed as

AnimalsArachidonic AcidAtherosclerosisDNA MethylationEpigenesis, GeneticFibroblastsGenome, HumanHumansLipid MetabolismMiceMonocytesOleic AcidPPAR alphaArachidonic AcidOleic AcidPPAR alphaDNA methylationepigenomicsfatty acidPPARsirtuinβ-oxidation

Identifiers

PMID27088456
PMCPMC4889238
OpenAlexW2341463531

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.