Evidence map›Paper›PMID 27099397›Full record

ReviewJournal of lipid research2016

The Hybrid Mouse Diversity Panel: a resource for systems genetics analyses of metabolic and cardiovascular traits.

Aldons J Lusis, Marcus M Seldin, Hooman Allayee, Brian J Bennett, Mete Civelek, Richard C Davis, Eleazar Eskin, Charles R Farber, Simon Hui, Margarete Mehrabian and 8 more

Abstract readReview
In one paragraph

Review in Journal of lipid research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed.

  1. Article
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  9. NAD Metabolism Regulates Proliferation of Macrophages in Atherosclerosis.Arteriosclerosis, thrombosis, and vascular biology · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. The mouse resource at National Resource Center for Mutant Mice of China.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Aldons J LusisDepartments of Medicine, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA Microbiology, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA Human Genetics, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA jlusis@mednet.ucla.edu.
Marcus M SeldinDepartments of Medicine, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA.
Hooman AllayeeDepartment of Preventive Medicine, University of Southern California Keck School of Medicine, Los Angeles, CA.
Brian J BennettDepartment of Genetics, University of North Carolina, Chapel Hill, NC.
Mete CivelekDepartments of Biomedical Engineering University of Virginia, Charlottesville, VA.
Richard C DavisDepartments of Medicine, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA.
Eleazar EskinDepartments of Computer Science, University of California-Los Angeles, Los Angeles, CA.
Charles R FarberPublic Health Sciences, University of Virginia, Charlottesville, VA.
Simon HuiDepartments of Medicine, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA.
Margarete MehrabianDepartments of Medicine, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA.
Frode NorheimDepartments of Medicine, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA.
Calvin PanHuman Genetics, University of California-Los Angeles, Los Angeles, CA.
Brian ParksDepartment of Nutritional Sciences, University of Wisconsin-Madison, Madison, WI.
Christoph D RauAnesthesiology, University of California-Los Angeles, Los Angeles, CA.
Desmond J SmithMolecular and Medical Pharmacology, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA.
Thomas VallimDepartments of Medicine, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA.
Yibin WangAnesthesiology, University of California-Los Angeles, Los Angeles, CA.
Jessica WangDepartments of Medicine, David Geffen School of Medicine, University of California-Los Angeles, Los Angeles, CA.

Funding

ULTRASTRUCTURE OF THE INTIMA IN EARLY LESION FORMATIONP01HL030568 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI FOGELMAN, ALAN M · 1985 to 2019
$55.2M
Systems genomics of metabolic syndrome traitsP01HL028481 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE · 1985 to 2019
$50.2M
Translational Research Support CoreP30ES007048 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ROB S MCCONNELL · 1996 to 2026
$46.4M
UNIV OF NORTH CAROLINA CLINICAL NUTRITION RESEARCH UNITP30DK056350 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Elizabeth J Mayer-Davis · 1999 to 2026
$31.6M
Systems Approach to Unraveling the Genetic Basis of Heart FailureR01HL114437 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DENG, MARIO C., KARMA, ALAIN S · 2013 to 2016
$4.7M
A Systems Approach to Dissect Genetic Basis of Heart FailureR01HL123295 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE, WANG, YIBIN · 2014 to 2017
$2.6M
Systems Genetics of Osteoblast ActivityR01AR064790 · NIAMS · UNIVERSITY OF VIRGINIA · PI ACKERT-BICKNELL, CHERYL LYNNE, FARBER, CHARLES R · 2015 to 2019
$2.0M
Discovery of Bone Formation Genes through Integrative GenomicsR01AR057759 · NIAMS · UNIVERSITY OF VIRGINIA · PI FARBER, CHARLES R · 2011 to 2015
$1.7M
Systems Genetics Analysis of Gene-by-Environment Interactions in ObesityR00HL123021 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI PARKS, BRIAN WESLEY · 2016 to 2018
$747k
NHLBI NIH HHS P01 HL028481NHLBI NIH HHS P01 HL030568NHLBI NIH HHS R00 HL123021NHLBI NIH HHS R01 HL114437NHLBI NIH HHS R01 HL123295NIAMS NIH HHS R01 AR057759NIDDK NIH HHS P30 DK056350NIEHS NIH HHS P30 ES007048
6 · The paper itself

Abstract

The Hybrid Mouse Diversity Panel (HMDP) is a collection of approximately 100 well-characterized inbred strains of mice that can be used to analyze the genetic and environmental factors underlying complex traits. While not nearly as powerful for mapping genetic loci contributing to the traits as human genome-wide association studies, it has some important advantages. First, environmental factors can be controlled. Second, relevant tissues are accessible for global molecular phenotyping. Finally, because inbred strains are renewable, results from separate studies can be integrated. Thus far, the HMDP has been studied for traits relevant to obesity, diabetes, atherosclerosis, osteoporosis, heart failure, immune regulation, fatty liver disease, and host-gut microbiota interactions. High-throughput technologies have been used to examine the genomes, epigenomes, transcriptomes, proteomes, metabolomes, and microbiomes of the mice under various environmental conditions. All of the published data are available and can be readily used to formulate hypotheses about genes, pathways and interactions.

Indexed as

Disease Models, AnimalAnimalsAtherosclerosisCardiovascular DiseasesGenome-Wide Association StudyHeart FailureHumansHybridization, GeneticInsulin ResistanceMetabolic DiseasesMiceMicrobiotaObesityOsteoporosisQuantitative Trait LociTranscriptomeaherosclerosisgene-by-diet interactiongene expressiongene mappingheart failureinsulin resistancemicrobiotaobesityosteoporosis

Identifiers

PMID27099397
PMCPMC4878195

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.