Evidence map›Paper›PMID 27135490›Full record

ArticlePlants (Basel, Switzerland)2014

Increasing Phosphatidylinositol (4,5)-Bisphosphate Biosynthesis Affects Basal Signaling and Chloroplast Metabolism in Arabidopsis thaliana.

Yang Ju Im, Caroline M Smith, Brian Q Phillippy, Deserah Strand, David M Kramer, Amy M Grunden, Wendy F Boss

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Lipid kinases PIP5K7 and PIP5K9 are required for polyamine-triggered KThe Plant journal : for cell and molecular biology · 2020
    Article
  2. The Tonoplastic Inositol Transporter INT1 FromFrontiers in plant science · 2018
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yang Ju ImDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA. yangju92@hotmail.com.
Caroline M SmithDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA. cmsmith5@ncsu.edu.
Brian Q PhillippyDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA. brian_phillippy@ncsu.edu.
Deserah StrandDOE-Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA. strandd1@msu.edu.
David M KramerDOE-Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA. kramer8@msu.edu.
Amy M GrundenDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA. amy_grunden@ncsu.edu.
Wendy F BossDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA. wendy_boss@ncsu.edu.
North Carolina State University · USMichigan State University · US

Funding

UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI HUNT, JOAN SHERAR · 2001 to 2011
$38.1M
NCRR NIH HHS P20 RR016475
6 · The paper itself

Abstract

One challenge in studying the second messenger inositol(1,4,5)-trisphosphate (InsP₃) is that it is present in very low amounts and increases only transiently in response to stimuli. To identify events downstream of InsP₃, we generated transgenic plants constitutively expressing the high specific activity, human phosphatidylinositol 4-phosphate 5-kinase Iα (HsPIPKIα). PIP5K is the enzyme that synthesizes phosphatidylinositol (4,5)-bisphosphate (PtdIns(4,5)P₂); this reaction is flux limiting in InsP₃ biosynthesis in plants. Plasma membranes from transgenic Arabidopsis expressing HsPIPKIα had 2-3 fold higher PIP5K specific activity, and basal InsP₃ levels in seedlings and leaves were >2-fold higher than wild type. Although there was no significant difference in photosynthetic electron transport, HsPIPKIα plants had significantly higher starch (2-4 fold) and 20% higher anthocyanin compared to controls. Starch content was higher both during the day and at the end of dark period. In addition, transcripts of genes involved in starch metabolism such as SEX1 (glucan water dikinase) and SEX4 (phosphoglucan phosphatase), DBE (debranching enzyme), MEX1 (maltose transporter), APL3 (ADP-glucose pyrophosphorylase) and glucose-6-phosphate transporter (Glc6PT) were up-regulated in the HsPIPKIα plants. Our results reveal that increasing the phosphoinositide (PI) pathway affects chloroplast carbon metabolism and suggest that InsP₃ is one component of an inter-organelle signaling network regulating chloroplast metabolism.

Indexed as

Arabidopsiscalciumcarbon metabolismchloroplastinositol trisphosphatephosphatidylinositol phosphate kinasephosphoinositidephotosynthesisstarch

Identifiers

PMID27135490
PMCPMC4844314
OpenAlexW2028242641

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.