Evidence map›Paper›PMID 27144335›Full record

ArticleOncotarget2016

Identification of genes that are essential to restrict genome duplication to once per cell division.

Alex Vassilev, Chrissie Y Lee, Boris Vassilev, Wenge Zhu, Pinar Ormanoglu, Scott E Martin, Melvin L DePamphilis

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Adaptive exchange sustains cullin-RING ubiquitin ligase networks and proper licensing of DNA replication.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The broken cycle: E2F dysfunction in cancer.Nature reviews. Cancer · 2019
    Review
  10. Flow Cytometry Analysis of Fungal Ploidy.Current protocols in microbiology · 2018
    Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Alex VassilevNational Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892-2753, USA.
Chrissie Y LeeNational Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892-2753, USA.
Boris VassilevNational Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892-2753, USA.
Wenge ZhuDepartment of Biochemistry and Molecular Biology, George Washington University, Washington DC 20037, USA.
Pinar OrmanogluNational Center of Advancing Translational Sciences, National Institutes of Health, Rockville, MD 20850, USA.
Scott E MartinNational Center of Advancing Translational Sciences, National Institutes of Health, Rockville, MD 20850, USA.
Melvin L DePamphilisNational Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892-2753, USA.
National Institutes of Health · USEunice Kennedy Shriver National Institute of Child Health and Human Development · USGeorge Washington University · USNational Center for Advancing Translational Sciences · US

Funding

Initiation Of DNA Replication In Mammalian ChromosomesZIAHD000506 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI DEPAMPHILIS, MELVIN · 2009 to 2023
$15.4M
Trans-NIH RNAi Facility (TNRF)ZICTR000041 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI CHENG, KEN · 2015 to 2025
$9.4M
Gene Expression At The Beginning Of Mammalian DevelopmentZIAHD000507 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI DEPAMPHILIS, MELVIN · 2009 to 2018
$8.6M
The Role of And-1 in DNA Damage ResponseR01CA177898 · NCI · GEORGE WASHINGTON UNIVERSITY · PI ZHU, WENGE · 2014 to 2018
$1.6M
The Regulation of Cisplatin resistance in ovarian cancerR01CA184717 · NCI · GEORGE WASHINGTON UNIVERSITY · PI ZHU, WENGE · 2014 to 2018
$1.6M
NCI NIH HHS R01 CA177898NCI NIH HHS R01 CA184717
6 · The paper itself

Abstract

Nuclear genome duplication is normally restricted to once per cell division, but aberrant events that allow excess DNA replication (EDR) promote genomic instability and aneuploidy, both of which are characteristics of cancer development. Here we provide the first comprehensive identification of genes that are essential to restrict genome duplication to once per cell division. An siRNA library of 21,584 human genes was screened for those that prevent EDR in cancer cells with undetectable chromosomal instability. Candidates were validated by testing multiple siRNAs and chemical inhibitors on both TP53+ and TP53- cells to reveal the relevance of this ubiquitous tumor suppressor to preventing EDR, and in the presence of an apoptosis inhibitor to reveal the full extent of EDR. The results revealed 42 genes that prevented either DNA re-replication or unscheduled endoreplication. All of them participate in one or more of eight cell cycle events. Seventeen of them have not been identified previously in this capacity. Remarkably, 14 of the 42 genes have been shown to prevent aneuploidy in mice. Moreover, suppressing a gene that prevents EDR increased the ability of the chemotherapeutic drug Paclitaxel to induce EDR, suggesting new opportunities for synthetic lethalities in the treatment of human cancers.

Indexed as

AneuploidyAnimalsCell DivisionDNA ReplicationHCT116 CellsHumansMiceNeoplasmsaneuploidycell cycle regulationDNA re-replicationendoreplicationpolyploidy

Identifiers

PMID27144335
PMCPMC5085202
OpenAlexW2342508811

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.