Evidence map›Paper›PMID 27185157›Full record

ArticleScientific reports2016

Integrated metabolomic and transcriptome analyses reveal finishing forage affects metabolic pathways related to beef quality and animal welfare.

José A Carrillo, Yanghua He, Yaokun Li, Jianan Liu, Richard A Erdman, Tad S Sonstegard, Jiuzhou Song

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
11.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it, 87 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

José A CarrilloDepartment of Animal &Avian Sciences, University of Maryland, College Park, MD 20742, USA.
Yanghua HeDepartment of Animal &Avian Sciences, University of Maryland, College Park, MD 20742, USA.
Yaokun LiCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, P.R. China, 712100.
Jianan LiuDepartment of Animal &Avian Sciences, University of Maryland, College Park, MD 20742, USA.
Richard A ErdmanDepartment of Animal &Avian Sciences, University of Maryland, College Park, MD 20742, USA.
Tad S SonstegardRecombinetics Inc., 1246 University Ave. W, St. Paul, MN 55104, USA.
Jiuzhou SongDepartment of Animal &Avian Sciences, University of Maryland, College Park, MD 20742, USA.
University of Maryland, College Park · USNorthwest A&F University · CNRecombinetics (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Beef represents a major dietary component and source of protein in many countries. With an increasing demand for beef, the industry is currently undergoing changes towards naturally produced beef. However, the true differences between the feeding systems, especially the biochemical and nutritional aspects, are still unclear. Using transcriptome and metabolome profiles, we identified biological pathways related to the differences between grass- and grain-fed Angus steers. In the latissimus dorsi muscle, we have recognized 241 differentially expressed genes (FDR < 0.1). The metabolome examinations of muscle and blood revealed 163 and 179 altered compounds in each tissue (P < 0.05), respectively. Accordingly, alterations in glucose metabolism, divergences in free fatty acids and carnitine conjugated lipid levels, and altered β-oxidation have been observed. The anti-inflammatory n3 polyunsaturated fatty acids are enriched in grass finished beef, while higher levels of n6 PUFAs in grain finished animals may promote inflammation and oxidative stress. Furthermore, grass-fed animals produce tender beef with lower total fat and a higher omega3/omega6 ratio than grain-fed ones, which could potentially benefit consumer health. Most importantly, blood cortisol levels strongly indicate that grass-fed animals may experience less stress than the grain-fed individuals. These results will provide deeper insights into the merits and mechanisms of muscle development.

Indexed as

Animal WelfareAnimal FeedAnimal HusbandryAnimalsBloodCattleGene Expression ProfilingMeatMetabolic Networks and PathwaysMetabolomicsMusclesRed Meat

Identifiers

PMID27185157
PMCPMC4869019
OpenAlexW2401898117

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.