Evidence map›Paper›PMID 27196138›Full record

ArticlePloS one2016

Rescuing Perishable Neuroanatomical Information from a Threatened Biodiversity Hotspot: Remote Field Methods for Brain Tissue Preservation Validated by Cytoarchitectonic Analysis, Immunohistochemistry, and X-Ray Microcomputed Tomography.

Daniel F Hughes, Ellen M Walker, Paul M Gignac, Anais Martinez, Kenichiro Negishi, Carl S Lieb, Eli Greenbaum, Arshad M Khan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Daniel F HughesDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, United States of America.
Ellen M WalkerDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, United States of America.
Paul M GignacDepartment of Anatomy and Cell Biology, Oklahoma State University Center for Health Sciences, Tulsa, Oklahoma, United States of America.
Anais MartinezDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, United States of America.
Kenichiro NegishiDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, United States of America.
Carl S LiebDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, United States of America.
Eli GreenbaumDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, United States of America.
Arshad M KhanDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, United States of America.ORCID 0000-0003-0254-3546
The University of Texas at El Paso · USOklahoma State University Center for Health Sciences · US

Funding

TCCG12MD007592 · NIMHD · UNIVERSITY OF TEXAS EL PASO · PI KIRKEN, ROBERT A. · 2012 to 2018
$19.4M
Identifying and mapping functional connections of feeding control neurons in theSC3GM109817 · NIGMS · UNIVERSITY OF TEXAS EL PASO · PI KHAN, ARSHAD M. · 2014 to 2017
$441k
Howard Hughes Medical InstituteNIGMS NIH HHS SC3 GM109817NIMHD NIH HHS G12 MD007592
6 · The paper itself

Abstract

Biodiversity hotspots, which harbor more endemic species than elsewhere on Earth, are increasingly threatened. There is a need to accelerate collection efforts in these regions before threatened or endangered species become extinct. The diverse geographical, ecological, genetic, morphological, and behavioral data generated from the on-site collection of an individual specimen are useful for many scientific purposes. However, traditional methods for specimen preparation in the field do not permit researchers to retrieve neuroanatomical data, disregarding potentially useful data for increasing our understanding of brain diversity. These data have helped clarify brain evolution, deciphered relationships between structure and function, and revealed constraints and selective pressures that provide context about the evolution of complex behavior. Here, we report our field-testing of two commonly used laboratory-based techniques for brain preservation while on a collecting expedition in the Congo Basin and Albertine Rift, two poorly known regions associated with the Eastern Afromontane biodiversity hotspot. First, we found that transcardial perfusion fixation and long-term brain storage, conducted in remote field conditions with no access to cold storage laboratory equipment, had no observable impact on cytoarchitectural features of lizard brain tissue when compared to lizard brain tissue processed under laboratory conditions. Second, field-perfused brain tissue subjected to prolonged post-fixation remained readily compatible with subsequent immunohistochemical detection of neural antigens, with immunostaining that was comparable to that of laboratory-perfused brain tissue. Third, immersion-fixation of lizard brains, prepared under identical environmental conditions, was readily compatible with subsequent iodine-enhanced X-ray microcomputed tomography, which facilitated the non-destructive imaging of the intact brain within its skull. In summary, we have validated multiple approaches to preserving intact lizard brains in remote field conditions with limited access to supplies and a high degree of environmental exposure. This protocol should serve as a malleable framework for researchers attempting to rescue perishable and irreplaceable morphological and molecular data from regions of disappearing biodiversity. Our approach can be harnessed to extend the numbers of species being actively studied by the neuroscience community, by reducing some of the difficulty associated with acquiring brains of animal species that are not readily available in captivity.

Indexed as

BiodiversityEndangered SpeciesTissue PreservationAnimalsBrainConservation of Natural ResourcesEcologyEcosystemGeographyHeartImmunohistochemistryLizardsNeuroanatomyPerfusionUgandaX-Ray Microtomography

Identifiers

PMID27196138
PMCPMC4873048
OpenAlexW2399369365

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.