Evidence map›Paper›PMID 27347682›Full record

ArticlePloS one2016

Components of the Engulfment Machinery Have Distinct Roles in Corpse Processing.

Tracy L Meehan, Tony F Joudi, Allison K Timmons, Jeffrey D Taylor, Corey S Habib, Jeanne S Peterson, Shanan Emmanuel, Nathalie C Franc, Kimberly McCall

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Draper-mediated efferocytosis bybioRxiv : the preprint server for biology · 2026
    Article
  2. Hyperactive Rac converts sublethal to lethal trogocytosis in vivo.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. The phagocytic cyst cells inScience advances · 2022
    Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Phagocyte Responses to Cell Death in Flies.Cold Spring Harbor perspectives in biology · 2020
    Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Tracy L MeehanDepartment of Biology, Boston University, Boston, Massachusetts, United States of America.
Tony F JoudiDepartment of Biology, Boston University, Boston, Massachusetts, United States of America.
Allison K TimmonsDepartment of Biology, Boston University, Boston, Massachusetts, United States of America.
Jeffrey D TaylorDepartment of Biology, Boston University, Boston, Massachusetts, United States of America.
Corey S HabibDepartment of Biology, Boston University, Boston, Massachusetts, United States of America.
Jeanne S PetersonDepartment of Biology, Boston University, Boston, Massachusetts, United States of America.
Shanan EmmanuelDepartment of Biology, Boston University, Boston, Massachusetts, United States of America.
Nathalie C FrancThe Scripps Research Institute, Department of Immunology and Microbial Science, La Jolla, California, United States of America.
Kimberly McCallDepartment of Biology, Boston University, Boston, Massachusetts, United States of America.
Boston University · USScripps Research Institute · US

Funding

Programmed Cell Death in Drosophila DevelopmentR01GM060574 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI MCCALL, KIMBERLY A · 2001 to 2016
$4.5M
Apoptotic Cell-Induced Macrophage Signaling Pathways that Regulate PhagocytosisR01AI093687 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI FRANC, NATHALIE CLAUDINE · 2012 to 2016
$2.3M
Mechanisms of cell corpse clearanceR01GM094452 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI MCCALL, KIMBERLY A · 2011 to 2014
$1.3M
NIAID NIH HHS R01 AI093687NIGMS NIH HHS R01 GM060574NIGMS NIH HHS R01 GM094452
6 · The paper itself

Abstract

Billions of cells die in our bodies on a daily basis and are engulfed by phagocytes. Engulfment, or phagocytosis, can be broken down into five basic steps: attraction of the phagocyte, recognition of the dying cell, internalization, phagosome maturation, and acidification. In this study, we focus on the last two steps, which can collectively be considered corpse processing, in which the engulfed material is degraded. We use the Drosophila ovarian follicle cells as a model for engulfment of apoptotic cells by epithelial cells. We show that engulfed material is processed using the canonical corpse processing pathway involving the small GTPases Rab5 and Rab7. The phagocytic receptor Draper is present on the phagocytic cup and on nascent, phosphatidylinositol 3-phosphate (PI(3)P)- and Rab7-positive phagosomes, whereas integrins are maintained on the cell surface during engulfment. Due to the difference in subcellular localization, we investigated the role of Draper, integrins, and downstream signaling components in corpse processing. We found that some proteins were required for internalization only, while others had defects in corpse processing as well. This suggests that several of the core engulfment proteins are required for distinct steps of engulfment. We also performed double mutant analysis and found that combined loss of draper and αPS3 still resulted in a small number of engulfed vesicles. Therefore, we investigated another known engulfment receptor, Crq. We found that loss of all three receptors did not inhibit engulfment any further, suggesting that Crq does not play a role in engulfment by the follicle cells. A more complete understanding of how the engulfment and corpse processing machinery interact may enable better understanding and treatment of diseases associated with defects in engulfment by epithelial cells.

Indexed as

PhagocytosisAnimalsApoptosisCaenorhabditis elegansDrosophilaEndocytosisEpithelial CellsFemaleIntegrinsMembrane ProteinsMutationOvarian FolliclePhagocytesPhagosomesTransport VesiclesIntegrinsMembrane Proteins

Identifiers

PMID27347682
PMCPMC4922577
OpenAlexW2466058111

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.