Evidence map›Paper›PMID 27618959›Full record

ArticleScientific reports2016

The analysis of heterotaxy patients reveals new loss-of-function variants of GRK5.

Davor Lessel, Tariq Muhammad, Teresa Casar Tena, Barbara Moepps, Martin D Burkhalter, Marc-Phillip Hitz, Okan Toka, Axel Rentzsch, Stephan Schubert, Adelheid Schalinski and 4 more

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 10 institutions in 2 countries.

Davor LesselInstitute of Human Genetics, University Medical Center Hamburg-Eppendorf, 20246 Hamburg, Germany.
Tariq MuhammadDepartment of Pediatrics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Teresa Casar TenaInstitute for Biochemistry and Molecular Biology, Ulm University, 89081 Ulm, Germany.
Barbara MoeppsInstitute of Pharmacology and Toxicology, Ulm University Medical Center, 89081 Ulm, Germany.
Martin D BurkhalterInstitute for Biochemistry and Molecular Biology, Ulm University, 89081 Ulm, Germany.
Marc-Phillip HitzDepartment of Congenital Heart Disease and Pediatric Cardiology, University Hospital Schleswig-Holstein, 24105 Kiel, Germany.
Okan TokaFriedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Department of Pediatric Cardiology, 91054 Erlangen, Germany.
Axel RentzschDepartment of Pediatric Cardiology, Saarland University Medical Center, 66421 Homburg, Germany.
Stephan SchubertGerman Heart Institute Berlin, Department of Congenital Heart Disease and Pediatric Cardiology, 13353 Berlin, Germany.
Adelheid SchalinskiCompetence Network for Congenital Heart Defects/National Register for Congenital Heart Defects, 13353 Berlin, Germany.
Ulrike M M BauerCompetence Network for Congenital Heart Defects/National Register for Congenital Heart Defects, 13353 Berlin, Germany.
Christian KubischInstitute of Human Genetics, University Medical Center Hamburg-Eppendorf, 20246 Hamburg, Germany.
Stephanie M WareDepartment of Pediatrics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Melanie PhilippInstitute for Biochemistry and Molecular Biology, Ulm University, 89081 Ulm, Germany.
Universität Ulm · DEGerman National Bone Marrow Donor Registry · DEDeutsches Herzzentrum München · DEFriedrich-Alexander-Universität Erlangen-Nürnberg · DEIndiana University – Purdue University Indianapolis · USIndiana University School of MedicineSaarland University · DEUniversität Hamburg · DEUniversity Hospital Schleswig-Holstein · DEUniversity Medical Center Hamburg-Eppendorf · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

G protein-coupled receptor kinase 5 (GRK5) is a regulator of cardiac performance and a potential therapeutic target in heart failure in the adult. Additionally, we have previously classified GRK5 as a determinant of left-right asymmetry and proper heart development using zebrafish. We thus aimed to identify GRK5 variants of functional significance by analysing 187 individuals with laterality defects (heterotaxy) that were associated with a congenital heart defect (CHD). Using Sanger sequencing we identified two moderately frequent variants in GRK5 with minor allele frequencies <10%, and seven very rare polymorphisms with minor allele frequencies <1%, two of which are novel variants. Given their evolutionarily conserved position in zebrafish, in-depth functional characterisation of four variants (p.Q41L, p.G298S, p.R304C and p.T425M) was performed. We tested the effects of these variants on normal subcellular localisation and the ability to desensitise receptor signalling as well as their ability to correct the left-right asymmetry defect upon Grk5l knockdown in zebrafish. While p.Q41L, p.R304C and p.T425M responded normally in the first two aspects, neither p.Q41L nor p.R304C were capable of rescuing the lateralisation phenotype. The fourth variant, p.G298S was identified as a complete loss-of-function variant in all assays and provides insight into the functions of GRK5.

Indexed as

Loss of Function MutationAmino Acid SequenceAnimalsEmbryo, NonmammalianFemaleGene FrequencyGenetic Predisposition to DiseaseG-Protein-Coupled Receptor Kinase 5HEK293 CellsHeterotaxy SyndromeHumansIn Situ HybridizationMalePolymorphism, Single NucleotideSequence Homology, Amino AcidZebrafishG-Protein-Coupled Receptor Kinase 5GRK5 protein, humanZebrafish Proteins

Identifiers

PMID27618959
PMCPMC5020398
OpenAlexW2518919785

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.