Evidence map›Paper›PMID 27660391›Full record

ArticleThe Journal of biological chemistry2016

TCL/RhoJ Plasma Membrane Localization and Nucleotide Exchange Is Coordinately Regulated by Amino Acids within the N Terminus and a Distal Loop Region.

Karly L Ackermann, Rebecca R Florke, Shannon S Reyes, Brooke R Tader, Michael J Hamann

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Rhoj Is a Novel Target for Progression and Invasion of Glioblastoma by Impairing Cytoskeleton Dynamics.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2020
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Karly L AckermannFrom the Biology Department, Bemidji State University, Bemidji, Minnesota 56601.
Rebecca R FlorkeFrom the Biology Department, Bemidji State University, Bemidji, Minnesota 56601.
Shannon S ReyesFrom the Biology Department, Bemidji State University, Bemidji, Minnesota 56601.
Brooke R TaderFrom the Biology Department, Bemidji State University, Bemidji, Minnesota 56601.
Michael J HamannFrom the Biology Department, Bemidji State University, Bemidji, Minnesota 56601 mhamann@bemidjistate.edu.
Bemidji State University · US

Funding

Pilot Projects CoreP30GM103329 · NIGMS · UNIVERSITY OF NORTH DAKOTA · PI GEIGER, JONATHAN DAVID · 2012 to 2016
$5.1M
NIGMS NIH HHS P30 GM103329
6 · The paper itself

Abstract

TCL/RhoJ is a Cdc42-related Rho GTPase with reported activities in endothelial cell biology and angiogenesis, metastatic melanoma, and corneal epithelial cells; however, less is known about how it is inherently regulated in comparison to its closest homologues TC10 and Cdc42. TCL has an N-terminal extension of 18 amino acids in comparison to Cdc42, but the function of this amino acid sequence has not been elucidated. A truncation mutant lacking the N terminus (ΔN) was found to alter TCL plasma membrane localization and nucleotide binding, and additional truncation and point mutants mapped the alterations of TCL biochemistry to amino acids 17-20. Interestingly, whereas the TCL ΔN mutant clearly influenced nucleotide exchange, deletion of the N terminus from its closest homologue, TC10, did not have a similar effect. Chimeras of TCL and TC10 revealed amino acids 121-129 of TCL contributed to the differences in nucleotide loading. Together, these results identify amino acids within the N terminus and a loop region distal to the nucleotide binding pocket of TCL capable of allosterically regulating nucleotide exchange and thus influence membrane association of the protein.

Indexed as

Allosteric RegulationAmino AcidsAmino Acid SequenceBinding SitesCell MembraneHeLa CellsHumansModels, MolecularNucleotidesProtein Conformationrho GTP-Binding ProteinsSequence DeletionAmino AcidsNucleotidesrho GTP-Binding ProteinsRHOJ protein, humanallosteric regulationCDC42cell biologyGTPasemembrane traffickingRhoJRho (Rho GTPase)small GTPaseTCLvesicles

Identifiers

PMID27660391
PMCPMC5095414
OpenAlexW2521506370

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.