Evidence map›Paper›PMID 27715405›Full record

ReviewAutophagy2017

Autophagy in Dictyostelium: Mechanisms, regulation and disease in a simple biomedical model.

Ana Mesquita, Elena Cardenal-Muñoz, Eunice Dominguez, Sandra Muñoz-Braceras, Beatriz Nuñez-Corcuera, Ben A Phillips, Luis C Tábara, Qiuhong Xiong, Roberto Coria, Ludwig Eichinger and 5 more

Abstract readReview
In one paragraph

Review in Autophagy, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Guideline
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Proteomics identifies hypothermia induced adiponectin protects corneal endothelial cells via AMPK mediated autophagy in phacoemulsification.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2024
    Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Methods to Assess Autophagic Activity in Dictyostelium.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Ana Mesquitaa Instituto de Investigaciones Biomédicas "Alberto Sols" (CSIC-UAM) , Madrid , Spain.
Elena Cardenal-Muñozc Départment de Biochimie , Faculté des Sciences, Université de Genève , Switzerland.
Eunice Domingueza Instituto de Investigaciones Biomédicas "Alberto Sols" (CSIC-UAM) , Madrid , Spain.
Sandra Muñoz-Bracerasa Instituto de Investigaciones Biomédicas "Alberto Sols" (CSIC-UAM) , Madrid , Spain.
Beatriz Nuñez-Corcueraa Instituto de Investigaciones Biomédicas "Alberto Sols" (CSIC-UAM) , Madrid , Spain.
Ben A Phillipse Department of Biomedical Sciences , University of Sheffield , UK.
Luis C Tábaraa Instituto de Investigaciones Biomédicas "Alberto Sols" (CSIC-UAM) , Madrid , Spain.
Qiuhong Xiongf Center for Biochemistry, Medical Faculty, University of Cologne , Cologne , Germany.
Roberto Coriad Departamento de Genética Molecular , Instituto de Fisiología Celular, Universidad Nacional Autónoma de México , Mexico City , México.
Ludwig Eichingerf Center for Biochemistry, Medical Faculty, University of Cologne , Cologne , Germany.
Pierre Golsteing Centre d'Immunologie de Marseille-Luminy, Aix Marseille Université UM2 , Inserm, U1104, CNRS UMR7280, Marseille , France.
Jason S Kinge Department of Biomedical Sciences , University of Sheffield , UK.
Thierry Soldatic Départment de Biochimie , Faculté des Sciences, Université de Genève , Switzerland.
Olivier Vincenta Instituto de Investigaciones Biomédicas "Alberto Sols" (CSIC-UAM) , Madrid , Spain.
Ricardo Escalantea Instituto de Investigaciones Biomédicas "Alberto Sols" (CSIC-UAM) , Madrid , Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is a fast-moving field with an enormous impact on human health and disease. Understanding the complexity of the mechanism and regulation of this process often benefits from the use of simple experimental models such as the social amoeba Dictyostelium discoideum. Since the publication of the first review describing the potential of D. discoideum in autophagy, significant advances have been made that demonstrate both the experimental advantages and interest in using this model. Since our previous review, research in D. discoideum has shed light on the mechanisms that regulate autophagosome formation and contributed significantly to the study of autophagy-related pathologies. Here, we review these advances, as well as the current techniques to monitor autophagy in D. discoideum. The comprehensive bioinformatics search of autophagic proteins that was a substantial part of the previous review has not been revisited here except for those aspects that challenged previous predictions such as the composition of the Atg1 complex. In recent years our understanding of, and ability to investigate, autophagy in D. discoideum has evolved significantly and will surely enable and accelerate future research using this model.

Indexed as

AnimalsAutophagyAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsComputational BiologyDictyosteliumGene Expression RegulationGenetic Diseases, InbornGreen Fluorescent ProteinsHumansIntracellular Signaling Peptides and ProteinsPhagosomesProtozoan ProteinsSaccharomyces cerevisiaeAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsGreen Fluorescent ProteinsIntracellular Signaling Peptides and ProteinsProtozoan ProteinsAtg proteinsautophagic cell deathautophagyDictyosteliuminfectionsocial amoeba

Identifiers

PMID27715405
PMCPMC5240833

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.