Evidence map›Paper›PMID 27716615›Full record

ArticleOncotarget2016

PITX2 and PANCR DNA methylation predicts overall survival in patients with head and neck squamous cell carcinoma.

Verena Sailer, Emily Eva Holmes, Heidrun Gevensleben, Diane Goltz, Freya Dröge, Luka de Vos, Alina Franzen, Friederike Schröck, Friedrich Bootz, Glen Kristiansen and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Review
  5. Characterization of Epigenomic Alterations in HPV16+ Head and Neck Squamous Cell Carcinomas.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2022
    Article
  6. The expression and methylation ofFrontiers in genetics · 2022
    Article
  7. Review
  8. Article
  9. Article
  10. Targeted methylation sequencing of plasma cell-free DNA for cancer detection and classification.Annals of oncology : official journal of the European Society for Medical Oncology · 2018
    Article
  11. Article
  12. Review
  13. Article
  14. The Predictive Value ofDisease markers · 2017
    Review
  15. Article
  16. Clinical epigenetics · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Verena SailerWeill Medical College of Cornell University and New York Presbyterian Hospital, Department of Pathology and Laboratory Medicine, New York, NY, USA.
Emily Eva HolmesInstitute of Pathology, University Hospital of Bonn, Bonn, Germany.
Heidrun GevenslebenInstitute of Pathology, University Hospital of Bonn, Bonn, Germany.
Diane GoltzInstitute of Pathology, University Hospital of Bonn, Bonn, Germany.
Freya DrögeDepartment of Otorhinolaryngology, University Hospital Essen, University of Duisburg-Essen, Essen, Germany.
Luka de VosUniversity Hospital Bonn, Department of Otolaryngology, Head and Neck Surgery, Bonn, Germany.
Alina FranzenUniversity Hospital Bonn, Department of Otolaryngology, Head and Neck Surgery, Bonn, Germany.
Friederike SchröckDepartment of Addictive Disorders and Addiction Medicine, LVR Hospital Bonn, Bonn, Germany.
Friedrich BootzUniversity Hospital Bonn, Department of Otolaryngology, Head and Neck Surgery, Bonn, Germany.
Glen KristiansenInstitute of Pathology, University Hospital of Bonn, Bonn, Germany.
Andreas SchröckUniversity Hospital Bonn, Department of Otolaryngology, Head and Neck Surgery, Bonn, Germany.
Dimo DietrichInstitute of Pathology, University Hospital of Bonn, Bonn, Germany.
University Hospital Bonn · DELVR-Klinik Bonn · DENew York Hospital Queens · USUniversity of Duisburg-Essen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSquamous cell carcinoma of the head and neck region (HNSCC) is a common malignant disease accompanied by a high risk of local or distant recurrence after curative-intent treatment. Biomarkers that allow for the prediction of disease outcome can guide clinicians with respect to treatment and surveillance strategies. Here, the methylation status of PITX2 and an adjacent lncRNA (PANCR) were evaluated for their ability to predict overall survival in HNSCC patients.

resultsPITX2 hypermethylation was associated with a better overall survival (hazard ratio, HR = 0.51, 95%CI: 0.35-0.74, p<0.001), while PANCR hypermethylation was significantly associated with an increased risk of death (HR = 1.64, 95%CI: 1.12-2.39, p=0.010).

methodsQuantitative, methylation-specific real-time PCR assays for PITX2 and PANCR were employed to measure bisulfite-converted DNA from formalin-fixed, paraffin-embedded (FFPE) tissues in a cohort of 399 patients with localized or locally advanced HNSCC who received curative-intent treatment (surgery with optional adjuvant radiochemotherapy or definite radiochemotherapy).

conclusionsPITX2 and PANCR methylation status were shown to be independent predictors for overall survival in HNSCC patients. Tissue-based methylation testing could therefore potentially be employed to identify patients with a high risk for death who might benefit from a more radical or alternative treatment.

Indexed as

DNA MethylationAdultAgedBiomarkers, TumorCarcinoma, Squamous CellFemaleGenetic Association StudiesHead and Neck NeoplasmsHomeobox Protein PITX2Homeodomain ProteinsHumansKaplan-Meier EstimateMaleMiddle AgedNeoplasm GradingNeoplasm StagingBiomarkers, TumorHomeobox Protein PITX2Homeodomain ProteinsRNA, Long NoncodingTranscription FactorsbiomarkerDNA methylationhead and neck squamous cell carcinomaPANCRPITX2

Identifiers

PMID27716615
PMCPMC5342781
OpenAlexW2528819049

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.