Evidence map›Paper›PMID 27723757›Full record

SynthesisNature genetics2016

Genome-wide association studies of autoimmune vitiligo identify 23 new risk loci and highlight key pathways and regulatory variants.

Ying Jin, Genevieve Andersen, Daniel Yorgov, Tracey M Ferrara, Songtao Ben, Kelly M Brownson, Paulene J Holland, Stanca A Birlea, Janet Siebert, Anke Hartmann and 34 more

2 registry-linked trialsOpen access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 188 papers, 13 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
188citing papers in PubMed, 13 pooled it
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03859518 completednot on this map

Study of the Role of Innate Lymphoid Cells and Natural Killer Cells in Immune Activation of Vitiligo

TypeobservationalSponsorCentre Hospitalier Universitaire de NiceRan2016 to 2019Enrolled20ConditionsVitiligoArmsblood and skin samples
NCT05511493 naunknown statusnot on this mapstarted 2022, after this paper: background citation

Efficacy of Platelet-rich Plasma With Fractional Erbium-YAG Laser Versus With Microneedling in Localized Stable Vitiligo

TypeinterventionalSponsorSouth Valley UniversityRan2022 to 2023Enrolled40ConditionsLocalized VitiligoArmsfractional Erbium-YAG laser, microneedling
3 · Its place in the literature

Who cites it

188 citing papers in PubMed, 13 syntheses or guidelines pooled it, 346 citations in OpenAlex.

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  6. Evaluation ofMedicina (Kaunas, Lithuania) · 2023
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  16. Methodological strategies for mappingWorld journal of methodology · 2026
    Review
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  20. The Role ofInternational journal of molecular sciences · 2026
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128 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

44 authors at 18 institutions in 9 countries.

Ying JinHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Genevieve AndersenHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Daniel YorgovDepartment of Mathematical and Statistical Sciences, University of Colorado Denver, Denver, Colorado, USA.
Tracey M FerraraHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Songtao BenHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Kelly M BrownsonHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Paulene J HollandHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Stanca A BirleaHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Janet SiebertCytoAnalytics, Denver, Colorado, USA.
Anke HartmannDepartment of Dermatology, University Hospital Erlangen, Erlangen, Germany.
Anne LienertDepartment of Dermatology, University Hospital Erlangen, Erlangen, Germany.
Nanja van GeelDepartment of Dermatology, Ghent University Hospital, Ghent, Belgium.
Jo LambertDepartment of Dermatology, Ghent University Hospital, Ghent, Belgium.
Rosalie M LuitenNetherlands Institute for Pigment Disorders, Department of Dermatology, Academic Medical Centre University of Amsterdam, Amsterdam, the Netherlands.
Albert WolkerstorferNetherlands Institute for Pigment Disorders, Department of Dermatology, Academic Medical Centre University of Amsterdam, Amsterdam, the Netherlands.
J P Wietze van der VeenNetherlands Institute for Pigment Disorders, Department of Dermatology, Academic Medical Centre University of Amsterdam, Amsterdam, the Netherlands.
Dorothy C BennettMolecular and Clinical Sciences Research Institute, St. George's, University of London, London, UK.
Alain TaïebCentre de Référence des Maladies Rares de la Peau, Department of Dermatology, Hôpital St.-André, Bordeaux, France.
Khaled EzzedineCentre de Référence des Maladies Rares de la Peau, Department of Dermatology, Hôpital St.-André, Bordeaux, France.
E Helen KempDepartment of Oncology and Metabolism, University of Sheffield, Sheffield, UK.
David J GawkrodgerDepartment of Oncology and Metabolism, University of Sheffield, Sheffield, UK.
Anthony P WeetmanDepartment of Oncology and Metabolism, University of Sheffield, Sheffield, UK.
Sulev KõksDepartment of Pathophysiology, University of Tartu, Tartu, Estonia.ORCID 0000-0001-6087-6643
Ele PransDepartment of Pathophysiology, University of Tartu, Tartu, Estonia.
Külli KingoDepartment of Dermatology, University of Tartu, Tartu, Estonia.
Maire KarelsonDepartment of Dermatology, University of Tartu, Tartu, Estonia.
Margaret R WallaceDepartment of Molecular Genetics and Microbiology, University of Florida College of Medicine, Gainesville, Florida, USA.
Wayne T McCormackDepartment of Pathology, Immunology, and Laboratory Medicine, University of Florida College of Medicine, Gainesville, Florida, USA.
Andreas OverbeckLumiderm, Madrid, Spain.
Silvia MorettiSection of Dermatology, Department of Surgery and Translational Medicine, University of Florence, Florence, Italy.
Roberta ColucciSection of Dermatology, Department of Surgery and Translational Medicine, University of Florence, Florence, Italy.
Mauro PicardoLaboratorio Fisiopatologia Cutanea, Istituto Dermatologico San Gallicano, Rome, Italy.
Nanette B SilverbergDepartment of Dermatology, Columbia University College of Physicians and Surgeons, New York, New York, USA.
Mats OlssonInternational Vitiligo Center, Uppsala, Sweden.
Yan ValleVitiligo Research Foundation, New York, New York, USA.
Igor KorobkoVitiligo Research Foundation, New York, New York, USA.
Markus BöhmDepartment of Dermatology, University of Münster, Münster, Germany.
Henry W LimDepartment of Dermatology, Henry Ford Hospital, Detroit, Michigan, USA.
Iltefat HamzaviDepartment of Dermatology, Henry Ford Hospital, Detroit, Michigan, USA.
Li ZhouDepartment of Dermatology, Henry Ford Hospital, Detroit, Michigan, USA.
Qing-Sheng MiDepartment of Dermatology, Henry Ford Hospital, Detroit, Michigan, USA.
Pamela R FainHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Stephanie A SantoricoHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
Richard A SpritzHuman Medical Genetics and Genomics Program, University of Colorado School of Medicine, Aurora, Colorado, USA.
University of Colorado Denver · USHenry Ford Hospital · USUniversity of Tartu · EEUniversity of Sheffield · GBGhent University Hospital · BEHôpital Saint-André · FRUniversitätsklinikum Erlangen · DEUniversity of Amsterdam · NLUniversity of Florence · ITUniversity of Florida · USColorado School of Public Health · USInstitute of Gene Biology · RUMedisch Centrum Haaglanden · NLPerrigo (United States) · USSan Gallicano Hospital · ITSt George's, University of London · GBSt. Luke's-Roosevelt Hospital Center · USUniversity of Münster · DE

Funding

VitGene International Consortium to Identify Susceptibility Genes for GeneralizedR01AR056292 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI SPRITZ, RICHARD ANDREW · 2008 to 2016
$6.9M
Transgenic and Gene Targeting CoreP30AR057212 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI HOGAN, CHRISTOPHER J · 2009 to 2018
$6.2M
VitiligoR01AR045584 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI SPRITZ, RICHARD ANDREW · 1999 to 2014
$6.2M
STUDIES OF HUMAN PIGMENTATION DISORDERSR01AR039892 · NIAMS · UNIVERSITY OF WISCONSIN MADISON · PI SPRITZ, RICHARD A · 1989 to 2005
$2.5M
NIAMS NIH HHS P30 AR057212NIAMS NIH HHS R01 AR039892NIAMS NIH HHS R01 AR045584NIAMS NIH HHS R01 AR056292
6 · The paper itself

Abstract

Vitiligo is an autoimmune disease in which depigmented skin results from the destruction of melanocytes, with epidemiological association with other autoimmune diseases. In previous linkage and genome-wide association studies (GWAS1 and GWAS2), we identified 27 vitiligo susceptibility loci in patients of European ancestry. We carried out a third GWAS (GWAS3) in European-ancestry subjects, with augmented GWAS1 and GWAS2 controls, genome-wide imputation, and meta-analysis of all three GWAS, followed by an independent replication. The combined analyses, with 4,680 cases and 39,586 controls, identified 23 new significantly associated loci and 7 suggestive loci. Most encode immune and apoptotic regulators, with some also associated with other autoimmune diseases, as well as several melanocyte regulators. Bioinformatic analyses indicate a predominance of causal regulatory variation, some of which corresponds to expression quantitative trait loci (eQTLs) at these loci. Together, the identified genes provide a framework for the genetic architecture and pathobiology of vitiligo, highlight relationships with other autoimmune diseases and melanoma, and offer potential targets for treatment.

Indexed as

Genetic Predisposition to DiseaseAutoimmune DiseasesFemaleGenome-Wide Association StudyGenotypeHumansMaleMelanomaQuantitative Trait LociRisk AssessmentVitiligo

Identifiers

PMID27723757
PMCPMC5120758
OpenAlexW2531815874

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.