Evidence map›Paper›PMID 27770200›Full record

ArticlePlanta2017

Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.

Hye-Yeon Seok, Dong-Hyuk Woo, Linh Vu Nguyen, Huong T Tran, Vaishali N Tarte, Syed Muhammad Muntazir Mehdi, Sun-Young Lee, Yong-Hwan Moon

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
12.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 75 citations in OpenAlex.

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  13. The NAC transcription factor family inFrontiers in plant science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Hye-Yeon SeokDepartment of Molecular Biology, Pusan National University, Busan, 609-735, South Korea.
Dong-Hyuk WooDepartment of Molecular Biology, Pusan National University, Busan, 609-735, South Korea.
Linh Vu NguyenDepartment of Molecular Biology, Pusan National University, Busan, 609-735, South Korea.
Huong T TranDepartment of Molecular Biology, Pusan National University, Busan, 609-735, South Korea.
Vaishali N TarteDepartment of Molecular Biology, Pusan National University, Busan, 609-735, South Korea.
Syed Muhammad Muntazir MehdiDepartment of Molecular Biology, Pusan National University, Busan, 609-735, South Korea.
Sun-Young LeeDepartment of Molecular Biology, Pusan National University, Busan, 609-735, South Korea.
Yong-Hwan MoonDepartment of Molecular Biology, Pusan National University, Busan, 609-735, South Korea. moonyh@pusan.ac.kr.ORCID http://orcid.org/0000-0003-1226-2262
Pusan National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionAtNAP , an Arabidopsis NAC transcription factor family gene, functions as a negative regulator via transcriptional repression of AREB1 in salt stress response. AtNAP is an NAC family transcription factor in Arabidopsis and is known to be a positive regulator of senescence. However, its exact function and underlying molecular mechanism in stress responses are not well known. Here, we investigated functional roles of AtNAP in salt stress response. AtNAP expression significantly increased at the seedling stage, with higher expression in both shoots and roots under NaCl, mannitol, and ABA treatments. T-DNA insertional loss-of-function mutants of AtNAP were more tolerant to salt stress than wild type (WT), whereas AtNAP-overexpressing transgenic plants (OXs) were more sensitive to salt stress than WT during germination, seedling development, and mature plant stage. Transcript levels of stress-responsive genes in the ABA-dependent pathway, such as AREB1, RD20, and RD29B, were significantly higher and lower in atnap mutants and AtNAP OXs, respectively, than in WT under salt stress conditions, suggesting that AtNAP might negatively regulate the expression of those genes under salt stress conditions. Indeed, AtNAP repressed the promoter activity of AREB1 under normal and salt stress conditions. These results indicate that AtNAP functions as a negative regulator in the salt stress response. Our results, together with previous studies, suggest that AtNAP functions as a negative regulator in osmotic stress responses, whereas it functions as a positive regulator in senescence.

Indexed as

ArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsCalcium-Binding ProteinsCold Shock Proteins and PeptidesGene Expression Regulation, PlantOsmotic PressurePlants, Genetically ModifiedPromoter Regions, GeneticSeedlingsSodium ChlorideStress, PhysiologicalArabidopsis ProteinsAt1g45249 protein, ArabidopsisBasic-Leucine Zipper Transcription FactorsCalcium-Binding ProteinsCold Shock Proteins and PeptidesNAP protein, ArabidopsisRD20 protein, ArabidopsisRD29B protein, ArabidopsisSodium ChlorideAtNAPNAC transcription factorNegative regulatorOsmotic stressPromoter repressionSalt stressSenescenceTranscriptional repressor

Identifiers

PMID27770200
OpenAlexW2538192590

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.