Evidence map›Paper›PMID 27840629›Full record

ArticleFrontiers in plant science2016

A Model Analysis of Mechanisms for Radial Microtubular Patterns at Root Hair Initiation Sites.

Pawel Krupinski, Behruz Bozorg, André Larsson, Stefano Pietra, Markus Grebe, Henrik Jönsson

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Pawel KrupinskiComputational Biology and Biological Physics, Department of Astronomy and Theoretical Physics, Lund University Lund, Sweden.
Behruz BozorgComputational Biology and Biological Physics, Department of Astronomy and Theoretical Physics, Lund University Lund, Sweden.
André LarssonComputational Biology and Biological Physics, Department of Astronomy and Theoretical Physics, Lund University Lund, Sweden.
Stefano PietraDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University Umeå, Sweden.
Markus GrebeDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå UniversityUmeå, Sweden; Institute of Biochemistry and Biology, Plant Physiology, University of PotsdamPotsdam, Germany.
Henrik JönssonComputational Biology and Biological Physics, Department of Astronomy and Theoretical Physics, Lund UniversityLund, Sweden; Sainsbury Laboratory, University of CambridgeCambridge, UK; Department of Applied Mathematics and Theoretical Physics, University of CambridgeCambridge, UK.
Lund University · SEUmeå Plant Science Centre · SEUniversity of Potsdam · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant cells have two main modes of growth generating anisotropic structures. Diffuse growth where whole cell walls extend in specific directions, guided by anisotropically positioned cellulose fibers, and tip growth, with inhomogeneous addition of new cell wall material at the tip of the structure. Cells are known to regulate these processes via molecular signals and the cytoskeleton. Mechanical stress has been proposed to provide an input to the positioning of the cellulose fibers via cortical microtubules in diffuse growth. In particular, a stress feedback model predicts a circumferential pattern of fibers surrounding apical tissues and growing primordia, guided by the anisotropic curvature in such tissues. In contrast, during the initiation of tip growing root hairs, a star-like radial pattern has recently been observed. Here, we use detailed finite element models to analyze how a change in mechanical properties at the root hair initiation site can lead to star-like stress patterns in order to understand whether a stress-based feedback model can also explain the microtubule patterns seen during root hair initiation. We show that two independent mechanisms, individually or combined, can be sufficient to generate radial patterns. In the first, new material is added locally at the position of the root hair. In the second, increased tension in the initiation area provides a mechanism. Finally, we describe how a molecular model of Rho-of-plant (ROP) GTPases activation driven by auxin can position a patch of activated ROP protein basally along a 2D root epidermal cell plasma membrane, paving the way for models where mechanical and molecular mechanisms cooperate in the initial placement and outgrowth of root hairs.

Indexed as

cellulose fiberscomposite materialcomputational morphodynamicsfinite element modelingmicrotubulesplant cell wallroot hair initiation

Identifiers

PMID27840629
PMCPMC5083785
OpenAlexW2541352733

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.