Evidence map›Paper›PMID 27925669›Full record

ArticleCurrent protocols in chemical biology2016

Biochemical, Biophysical and Cellular Techniques to Study the Guanine Nucleotide Exchange Factor, GIV/Girdin.

Pradipta Ghosh, Nicolas Aznar, Lee Swanson, I-Chung Lo, Inmaculada Lopez-Sanchez, Jason Ear, Cristina Rohena, Nicholas Kalogriopoulos, Linda Joosen, Ying Dunkel and 3 more

Abstract read
In one paragraph

Article in Current protocols in chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Pradipta GhoshDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, California.
Nicolas AznarDepartment of Medicine, University of California at San Diego, La Jolla, California.
Lee SwansonDepartment of Medicine, University of California at San Diego, La Jolla, California.
I-Chung LoDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, California.
Inmaculada Lopez-SanchezDepartment of Medicine, University of California at San Diego, La Jolla, California.
Jason EarDepartment of Medicine, University of California at San Diego, La Jolla, California.
Cristina RohenaDepartment of Medicine, University of California at San Diego, La Jolla, California.
Nicholas KalogriopoulosDepartment of Medicine, University of California at San Diego, La Jolla, California.
Linda JoosenDepartment of Medicine, University of California at San Diego, La Jolla, California.
Ying DunkelDepartment of Medicine, University of California at San Diego, La Jolla, California.
Nina SunDepartment of Medicine, University of California at San Diego, La Jolla, California.
Peter NguyenDepartment of Chemistry and Biochemistry, California State University Long Beach, Long Beach, California.
Deepali BhandariDepartment of Chemistry and Biochemistry, California State University Long Beach, Long Beach, California.

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DIANE M SIMEONE · 1985 to 2026
$124.9M
CSULB Building Biomedical Research Program: Overall ComponentUL1GM118979 · NIGMS · CALIFORNIA STATE UNIVERSITY LONG BEACH · PI CHUN, CHI-AH, DILLON, JESSE · 2015 to 2023
$20.7M
CSULB Building Biomedical Research Program: Student Training CoreTL4GM118980 · NIGMS · CALIFORNIA STATE UNIVERSITY LONG BEACH · PI CHUN, CHI-AH, DILLON, JESSE · 2015 to 2023
$12.3M
UCSD Cancer Center Training Program in Drug DevelopmentT32CA121938 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Michael Bouvet, Dwayne G. Stupack · 2006 to 2026
$10.3M
Training Grant in GastroenterologyT32DK007202 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GHOSH, PRADIPTA · 1985 to 2022
$7.7M
Spatial Regulation of RGS and G Protein SignalingR01CA100768 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GHOSH, PRADIPTA · 2003 to 2019
$7.4M
CSULB Building Biomedical Research Program: Research Enrichment CoreRL5GM118978 · NIGMS · CALIFORNIA STATE UNIVERSITY LONG BEACH · PI CHUN, CHI-AH, DILLON, JESSE · 2015 to 2023
$7.3M
Predoctoral and Postdoctoral Training in Cancer Cell BiologyT32CA067754 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEAN Y.J. WANG · 1995 to 2026
$6.5M
CSULB Building Biomedical Research Program: Overall ComponentUL1MD009601 · NIMHD · CALIFORNIA STATE UNIVERSITY LONG BEACH · PI KINGSFORD, LAURA, URIZAR, GUIDO G. · 2014 to 2014
$2.3M
Modulation of G proteins by Growth FactorsR01CA160911 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GHOSH, PRADIPTA · 2013 to 2017
$1.8M
G Protein pathways as Novel Therapeutic and Diagnostic Targets in Liver FibrosisR01DK099226 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GHOSH, PRADIPTA · 2014 to 2016
$698k
NCI NIH HHS P30 CA023100NCI NIH HHS R01 CA100768NCI NIH HHS R01 CA160911NCI NIH HHS T32 CA067754NCI NIH HHS T32 CA121938NIDDK NIH HHS R01 DK099226NIDDK NIH HHS T32 DK007202NIGMS NIH HHS RL5 GM118978NIGMS NIH HHS TL4 GM118980NIGMS NIH HHS UL1 GM118979NIMHD NIH HHS UL1 MD009601
6 · The paper itself

Abstract

Canonical signal transduction via heterotrimeric G proteins is spatiotemporally restricted, i.e., triggered exclusively at the plasma membrane, only by agonist activation of G protein-coupled receptors via a finite process that is terminated within a few hundred milliseconds. Recently, a rapidly emerging paradigm has revealed a noncanonical pathway for activation of heterotrimeric G proteins via the nonreceptor guanidine-nucleotide exchange factor, GIV/Girdin. Biochemical, biophysical, and functional studies evaluating this pathway have unraveled its unique properties and distinctive spatiotemporal features. As in the case of any new pathway/paradigm, these studies first required an in-depth optimization of tools/techniques and protocols, governed by rationale and fundamentals unique to the pathway, and more specifically to the large multimodular GIV protein. Here we provide the most up-to-date overview of protocols that have generated most of what we know today about noncanonical G protein activation by GIV and its relevance in health and disease. © 2016 by John Wiley & Sons, Inc.

Indexed as

AnimalsBiophysicsFluorescent Antibody TechniqueGuanine Nucleotide Exchange FactorsHumansImmunoblottingImmunoprecipitationSignal TransductionGuanine Nucleotide Exchange FactorsFRETGIV/Girdinimmunoblottingimmunofluorescenceimmunoprecipitationin cellulo GST-pull downtrimeric G proteins

Identifiers

PMID27925669
PMCPMC5154557

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.